Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4807g00002 ATGCCACTTCTTAGCTCGTGCAGGCGTTTAGGCATGGGGCTTCAACATGGAAACGAGGGCATTCTGAATTGTTCATTATCGGGTTTGAGGACAGGTGTTTCAGAAATGACAGTTAGTTCTGTGTCTATGGCTATGCCTTCAGGCGTGGCTGATCCTTTTCTTGCTTCTTCTGCTTGGGATCCACTTGTTCCATTGACTCCAACTTTTGGAGGCTCTCTTATGGTTTTTCATAGTGAGTTTGCCGCCTCATCTTACCCTTTTGTTATGGAAAACCAGGGAATGAATGGTGACTCTCACCTTGTTCAATATATATCTGACTCAAATTATGTGGACATGGTCCCTAAGGTTCCCTCCTTTGGCCAAACTGGTTCTTACGATATAGCAGCTAACACAGGGTATCAGCCAAATCATAATCCAAGTAATGAGCCTGGAATAGCAAGGAGTCAAATAAATATTGAGCAATCTCAGAATGAAGGTTCAGCTCCTTCTGGTGAACATAAAAGAAAGCGAGGTCCAAATAAGAACGCTGAGGGGGAAGCAATGAAAGATTCTCCTGGGAAGAGCTGTGATGATGTAAAGGAACAATGTGAAAAGAAACCAAAAGTTGAACAAAATATTAGTGCAAATACAAGTGGAAAGCAATCTTTGAAGCAAAAGAAAGATGACTCTGAGAGTGGAGAAGCTCCCAAAGAAAATTTCATTCATGTGAGAGCCCGAAGAGGTCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTAAGGAGAGAAAAGATTAGTGAGCGAATGAAGTTGCTTCAAGAACTTGTTCCAGGATGCGACAAGATAACTGGTAAAGCGGTAATGCTGGATGAGATTATAAACTATGTGCAATCACTGCAACAACAGGTTGAGCTTTTGTCCATGAAACTTGCCACTGTAAAGCCAGAATTGAATTTTAATGTAGACCAAATCCGCTCCAAAGATTCACATATTGGACATGGACCTATTGGTGGATATGGTCCTGGCATCAACTGCACTCACCCATTCCAGGGAGGCATCATGCCTGGCCCATCAACACAATATCCTCTTGTGCCACAGTCTGTTTTGAACCAAAGCTTCTATCGAACGAGCTACAATTCCAGTACAGCTCTTGACAATTTGGGAAACAGT 1149 0.4273 MPLLSSCRRLGMGLQHGNEGILNCSLSGLRTGVSEMTVSSVSMAMPSGVADPFLASSAWDPLVPLTPTFGGSLMVFHSEFAASSYPFVMENQGMNGDSHLVQYISDSNYVDMVPKVPSFGQTGSYDIAANTGYQPNHNPSNEPGIARSQINIEQSQNEGSAPSGEHKRKRGPNKNAEGEAMKDSPGKSCDDVKEQCEKKPKVEQNISANTSGKQSLKQKKDDSESGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMKLLQELVPGCDKITGKAVMLDEIINYVQSLQQQVELLSMKLATVKPELNFNVDQIRSKDSHIGHGPIGGYGPGINCTHPFQGGIMPGPSTQYPLVPQSVLNQSFYRTSYNSSTALDNLGNS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4807g00002 383 SMART finulus 248 298 IPR011598 GO:0046983
Mupr4807g00002 383 CDD bHLH_AtBPE_like 232 317 - -
Mupr4807g00002 383 MobiDBLite consensus disorder prediction 154 228 - -
Mupr4807g00002 383 Pfam Helix-loop-helix DNA-binding domain 245 293 IPR011598 GO:0046983
Mupr4807g00002 383 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 149 345 IPR024097 GO:0006355
Mupr4807g00002 383 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 240 310 IPR036638 GO:0046983
Mupr4807g00002 383 Gene3D - 239 315 IPR036638 GO:0046983
Mupr4807g00002 383 FunFam Basic helix-loop-helix transcription factor 239 311 - -
Mupr4807g00002 383 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 242 292 IPR011598 GO:0046983
Mupr4807g00002 383 MobiDBLite consensus disorder prediction 162 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4807g00002 Mupr-Chr4807 36639 39602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4807g00002 12 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 40.483 1.43e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr4807g00002 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4807g00002 - - gmx:100787749 490.345