Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4804g00002 ATGGGTTTCACCAAGACCACAAATTTGTTCTACGCTTTGATCATACAATGTTTTCTTTTTTTACATGTGGGTATTGCCACAGACTCAATCATCTCTTCTCACTTCATCAAGGACCCTGAAACTATAACCTCCAGAAGTGGTAACTTCACGTTGGGGTTCTTCACCCCTCAAAACTCTACAAAGCGCTACGTTGGAATTTGGTACAAGTCTCAGTCCACAGTCATATGGGTTGCTAACAGAAACCAACCACTGAACGATTCTTCTGGAATTGTTACAATCTCTGAAAATGGCAATATTGTGCTACTGAATGGACTAAAACATGTCATTTGGTCATCAAATGTGTCCAATAAAGAGAGAAACAGGACGGTCACAATTACTCTTACAGTGACAATAGGAACTACCTTAATTGTCACTTGTGCATATATCATGTGGAGAAGGATATCAAACCACCCGGTGGGAGAGATCAATGCTGGTGGAGCACCTGTAGAATATACAAGTGACAATGTATTTGGATTTGGAGGTCTGTCACAAGTCCAACTGCAAGAGCTATTAATATTTAATTTTCAAAAGCTTGTAACTGCCACAAACAACTTTCACCCTTCTAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTATACAAGGGGCAATTGCAAGATGGTCAGCAAATTGCAGTTAAAAGACTTTCTAGGGCATCTGGACAAGGTCTGGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTGCTTGGCTGCTGTATTGAAGGGGAGGAAAAGATGTTGATTTATGAATACATGCCAAATAAAAGTTTGGATGCATATGTCTTTGATCCATCAAAAAATAAAGTCCTTGACTGGAGAAAACGCTTTAGCATAATAGAAGGAGTGGCTCGAGGAATGCTTTATCTTCATAGAGATTCCAGGCTAAAAATCATCCATAGAGATTTGAAGGCAAGTAATATTCTTCTAGATGACAAACAAAATCCAAAAATATCTGACTTTGGTATGGCCAAAATCTTTGGTGGGAATGAGGATCAGGCTAATACTAGAAGAGTTGTTGGAACATAG 1092 0.3938 MGFTKTTNLFYALIIQCFLFLHVGIATDSIISSHFIKDPETITSRSGNFTLGFFTPQNSTKRYVGIWYKSQSTVIWVANRNQPLNDSSGIVTISENGNIVLLNGLKHVIWSSNVSNKERNRTVTITLTVTIGTTLIVTCAYIMWRRISNHPVGEINAGGAPVEYTSDNVFGFGGLSQVQLQELLIFNFQKLVTATNNFHPSNKLGQGGFGPVYKGQLQDGQQIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNKSLDAYVFDPSKNKVLDWRKRFSIIEGVARGMLYLHRDSRLKIIHRDLKASNILLDDKQNPKISDFGMAKIFGGNEDQANTRRVVGT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4804g00002 363 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Mupr4804g00002 363 Gene3D Phosphorylase Kinase; domain 1 172 273 - -
Mupr4804g00002 363 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 123 IPR036426 -
Mupr4804g00002 363 ProSiteProfiles Protein kinase domain profile. 198 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4804g00002 363 SMART blect_4 33 151 IPR001480 -
Mupr4804g00002 363 Gene3D Transferase(Phosphotransferase) domain 1 274 363 - -
Mupr4804g00002 363 Gene3D - 22 137 IPR036426 -
Mupr4804g00002 363 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 106 363 - -
Mupr4804g00002 363 Pfam D-mannose binding lectin 73 127 IPR001480 -
Mupr4804g00002 363 CDD B_lectin 33 120 IPR001480 -
Mupr4804g00002 363 SUPERFAMILY Protein kinase-like (PK-like) 180 363 IPR011009 -
Mupr4804g00002 363 FunFam receptor-like serine/threonine-protein kinase SD1-8 172 273 - -
Mupr4804g00002 363 Pfam Protein tyrosine and serine/threonine kinase 201 349 IPR001245 GO:0004672|GO:0006468
Mupr4804g00002 363 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 274 363 - -
Mupr4804g00002 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Mupr4804g00002 363 SMART serkin_6 198 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4804g00002 Mupr-Chr4804 1909 4284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4804g00002 182 363 Receptor kinase-like Gene Family AT4G05200 66.484 7.67e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr4804g00002 PK_Tyr_Ser-Thr 9.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4804g00002 - - pvu:PHAVU_008G127000g 394.045