Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4800g00003 ATGGCAGCTTGTACTGTCTACTCAACACAATCTCTGAGCACAAACTGCTCCATCTCAACCCCATCAAAGACACAATATGGCTTCCACCAAAGACAGGTAGTTTTCTACACCACAAGCAGGAGGAACAGCAGGAGAGGCAGCAGCAGCAGCAGCAGCCGGTACGTGATAACATGCGCAGCAGGTGACTCACAGACGGTGGTGATTGGTTTGGCAGCTGACTCAGGGTGTGGGAAGAGCACCTTCATGAGGAGGCTGACCAGTGTGTTTGGAGGAGCAGCAGAGCCACCAAAGGGTGGGAACCCAGATTCCAACACTCTCATCAGTGACACCACCACAGTGATTTGCTTGGATGATTACCACTCATTGGATAGAACTGGCAGAAAGGAGAAGGGTGTCACTGCTCTTGACCCAAGAGCCAACAATTTTGATCTCATGTACGATCAAGTTAAAGCTCTCAAGGAAGGAATTTCTGTTCAAAAGCCAATCTACAACCATGTCACTGGTCTCTTGGATCCCCCCGAGCTCATCAAACCTCCCAAAATCTTAGTTATTGAAGGTTTGCACCCAATGTTTGATTCTCGTGTCAGAGAACTCTTGGACTTTAGCATCTACCTAGACATCAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGGCACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCATATATTGATCCACAAAAGCAATACGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTCATTCCTGATGACAACGAGGGTAAGATTTTAAGAGTAAGGTTGATACAGAAAGAGGGGGTTAAGTATTTTAGCCCAGTTTACTTGTTTGATGATGGCTCCACCATTTCCTGGATACCATGTGGAAGGAAGCTTACATGCTCCTACCCTGGCATCAAATTCTTCTATGGACCAGAGACTTACTACGGAAATGAGGTGTCAGTTGTAGAAATGGATGGACAATTTGACAGACTAGATGAGCTAATATACGTTGAGAGCCACCTAAGCAACCTCTCTACCAAGTTCTATGGAGAGGTTACTCAACAGATGTTGAAGCATGCTGATTTCCCAGGCAGCAACAATGGAACAGGTCTCTTCCAAACCATAATTGGTTTGAAGATAAGAGATCTATATGAACAGCTAATAGCCACCAAGGCTGAGACTCCAGTAGGAGCAGCAAAAGCTTAG 1236 0.4579 MAACTVYSTQSLSTNCSISTPSKTQYGFHQRQVVFYTTSRRNSRRGSSSSSSRYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYDQVKALKEGISVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDSRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPETYYGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIIGLKIRDLYEQLIATKAETPVGAAKA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4800g00003 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 336 IPR027417 -
Mupr4800g00003 411 ProSitePatterns Phosphoribulokinase signature. 216 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mupr4800g00003 411 FunFam Phosphoribulokinase 62 292 - -
Mupr4800g00003 411 PRINTS Phosphoribulokinase family signature 181 199 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mupr4800g00003 411 PRINTS Phosphoribulokinase family signature 234 257 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mupr4800g00003 411 PRINTS Phosphoribulokinase family signature 72 89 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mupr4800g00003 411 PRINTS Phosphoribulokinase family signature 216 233 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mupr4800g00003 411 PANTHER URIDINE KINASE 50 294 - -
Mupr4800g00003 411 CDD PRK 67 356 - -
Mupr4800g00003 411 Gene3D - 62 297 IPR027417 -
Mupr4800g00003 411 Pfam Phosphoribulokinase / Uridine kinase family 67 265 IPR006083 GO:0005524|GO:0016301
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4800g00003 119 293 PRT Gene Family AT3G27440 26.404 1.49e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4800g00003 K00855 - gmx:100807126 763.066