Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr479g00002 ATGTCGATGGCATCTCTAGTTAGAAGACGTTCAAGGGGCGAAATAAGGAACTTGGCCTCAGTTTCCAGTGGCCTCTTTCCAGCATTTGGCACCATCTTTGATGATGAAGGTTACTCGAAGTCGAACCTAAGAAAATATGTCATTGCTCCCTATGACCGTAGATATAAATTGTGGCAAACGTTCCTAGTGGCATTGGTAGTGTACTCTGCATGGGCATCTCCATTCGAGCTAGCTTTCAGAGAACTGTTGGTTGGGTCGCTATTGCCCCTTGATCTCATTGTCAATGCATTTTTTGCGGTTGACATAATGCTTACTTTCTTTGTGGCTTACTTAGATACATCAACTTATCTCCTCGTTGACGACCATAAGAAGATTGCTCTCAGGTACGTCAAAAAGTTACACTTCACCATGGATCTAGCCTCCAGTCTGCCACTTGAGCAGATACACCAAATTCTGACGGGTAAACCAAACAAAAGCGAGGTCTTTGGTTTCTTAATTATGCTTAGACTCTGGCGATTGAGGCGTGTTAGCGAACTCTTCGCAAGGAATGGCTTTTATGATCAGGTTTTCCTATTTGTAACTGAAACTGGAAACTGTTTAATTTCCAGGCTAGAAAAGGACATACGAATTAACTACTCGGCAACAAGATTTTGCAAACTTATATGCGTTACGCTATTCGCGGTGCACTTCGCAGGCTGTATGTATTTTTGGTTGGCTGTCCAGCACAAAACACCGAAACACACATGGATTGGGAACAAAACAGAGGATTTTAAAGATTTGAGCATCGGGTTGGGCTACACTTATTCCATGTACTGGTCTATTGCAACCCTTACCACTGTTGGCTATGGAGATTTTTATGCAGTGAATTTAACGGAAAAGCTTTTCAGCATTTTATACATGCTCTTTAACATCGGCCTCACTGCATATATAATCGGAAACATGACAAATCTCTTGGTTCACAGCTCTGTCCGAACCCTTGTCGTGGTAAATTTTATGAGGATTTCCATGGTCATTTCACCCTTAGCTTTACATTTGATAACACCAGCATATCAACCTAACACAAGGCTCCCGGAAGGCTTAAAGGAGCAAATGTTGGCACACATACAATTGAAGTTTAAGACTGCAGAGTTACAGCAAGAAGTGCTACAAGACCTACCTAAAACAATAAGATCCAGTATTGCTCAGCATCTTTTCCAAAACACAGTTGAAAACGCGTATTTATTTAAAGGAGTCTCTCATGATTTTATCACCCAGCTGGTGTCAGAAATGAAAGCAGAATACTACCCATCTAAGGTTGACATCATCTTGCAAAATGAGATGCCAACATATTTCTACATTTTGGTATCTGGATCACTGGATCTGTTGACATGCAAAAATGGGTCCGAACAGTTTTTGTTCAAACTTGAATCTGGAGGCATGGCGGGAGAAATAGGCGTGATGTTTAATATTCCACAACCTTTTACAGTGAGAAGTAGAGGGCTCTCCCAGGTCATACAAATGAATCATCATCATTTCAAGCAGATGGTGCAACCATTTAGTGACGATGGGAAGGCAATCATCAACAACTTTATGCAGTATTTGAAGGGCCTCAAAGGCAAGATGCTAGAAGAAATGGCATGTGTAACTGAATTGCTGGGTAACCTGCCTGATGAGCATCTAACACAAAATGAGGGTACACACGATGAAGTTTCAAGATATCAAGAAGATCCATATAAAGAAGGAAGTACAGGAAATTCCATACCACTGTCGTCAATCCCAGACCCCATTAGAGTTAAAATCCACGGACACCATCCCACTGAAAACAAAACGGGAAAAGAAACAACACAAAAGCTCATACTTCTCCCGAATTCGGTAGAAGAACTTTTCGGAGTTGCAGAGAAAAAATTCGGAAAAAGAGGAAGCAAAATTCTTATGGCTGACGGCTCAGAAGTAGAAGAACTAAGCGCAATAAGGGAGAATGATGAGTTATATATTCTCTGA 1980 0.4121 MSMASLVRRRSRGEIRNLASVSSGLFPAFGTIFDDEGYSKSNLRKYVIAPYDRRYKLWQTFLVALVVYSAWASPFELAFRELLVGSLLPLDLIVNAFFAVDIMLTFFVAYLDTSTYLLVDDHKKIALRYVKKLHFTMDLASSLPLEQIHQILTGKPNKSEVFGFLIMLRLWRLRRVSELFARNGFYDQVFLFVTETGNCLISRLEKDIRINYSATRFCKLICVTLFAVHFAGCMYFWLAVQHKTPKHTWIGNKTEDFKDLSIGLGYTYSMYWSIATLTTVGYGDFYAVNLTEKLFSILYMLFNIGLTAYIIGNMTNLLVHSSVRTLVVVNFMRISMVISPLALHLITPAYQPNTRLPEGLKEQMLAHIQLKFKTAELQQEVLQDLPKTIRSSIAQHLFQNTVENAYLFKGVSHDFITQLVSEMKAEYYPSKVDIILQNEMPTYFYILVSGSLDLLTCKNGSEQFLFKLESGGMAGEIGVMFNIPQPFTVRSRGLSQVIQMNHHHFKQMVQPFSDDGKAIINNFMQYLKGLKGKMLEEMACVTELLGNLPDEHLTQNEGTHDEVSRYQEDPYKEGSTGNSIPLSSIPDPIRVKIHGHHPTENKTGKETTQKLILLPNSVEELFGVAEKKFGKRGSKILMADGSEVEELSAIRENDELYIL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr479g00002 659 Pfam Cyclic nucleotide-binding domain 428 510 IPR000595 -
Mupr479g00002 659 Gene3D - 56 320 - -
Mupr479g00002 659 FunFam Potassium channel KAT2 395 531 - -
Mupr479g00002 659 SUPERFAMILY Voltage-gated potassium channels 50 318 - -
Mupr479g00002 659 Pfam Ion transport protein 56 319 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr479g00002 659 PANTHER POTASSIUM CHANNEL AKT1 18 538 IPR045319 GO:0005249|GO:0006813
Mupr479g00002 659 CDD CAP_ED 407 520 IPR000595 -
Mupr479g00002 659 SMART cnmp_10 407 524 IPR000595 -
Mupr479g00002 659 Gene3D Jelly Rolls 373 530 IPR014710 -
Mupr479g00002 659 Pfam KHA, dimerisation domain of potassium ion channel 590 658 IPR021789 -
Mupr479g00002 659 ProSiteProfiles KHA domain profile. 590 659 IPR021789 -
Mupr479g00002 659 ProSiteProfiles cAMP/cGMP binding motif profile. 407 526 IPR000595 -
Mupr479g00002 659 PRINTS EAG/ELK/ERG potassium channel family signature 310 319 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr479g00002 659 PRINTS EAG/ELK/ERG potassium channel family signature 91 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr479g00002 659 PRINTS EAG/ELK/ERG potassium channel family signature 292 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr479g00002 659 PRINTS EAG/ELK/ERG potassium channel family signature 266 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr479g00002 659 PRINTS EAG/ELK/ERG potassium channel family signature 102 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr479g00002 659 SUPERFAMILY cAMP-binding domain-like 349 526 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr479g00002 Mupr-Chr479 10713 17962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr479g00002 8 659 Ion Channels AT4G32650 52.246 0.0 640