Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4797g00001 TTGATACATTCCAAAATAAACATAGCTGCCCCACCCAACTTTGACAACTGGGCAGATGGTGAATATGAGAAACACTTGTATAAAACACAGCAAGTCTGGAATGGTAATGGACAGACCAGTAAAGTGATGAGCATGGAGACTGGATGGAAAAAGATTTGTGCCACCAGAAACTGGCTGGAAATGATGTGCGGCGGTGGAAAATGGCCAGAAACTGAAGTGCGACTTTGGAAATCTCACCAGAGAGAGCTGGCTACGACAATGAACCGCTTCGCTATAGGGATCATAGATGCAGCAGCATCATGCCACAATGCTCTGCGATGGTGCCATAGTGCTGCGATAGAATATTTCTGCTTACACACACCAACAGCCACAGCAGAGGAGGAAGAAAATATGCCTAGAGGTGGAGTCATAAAAATTTTGCCACTAGAGCAATCCTCTCCTCATAATCCACTCTGTATTCTTGCTAGGTTCCAAGAACAACAGGCTGAGCCTTATAGTGATCTAATGCCAATTGCAAAACTCAAAGCCTCTGGCACTCCAGATGTCAAAACAGAAGAAAAAATAGATACCATAATCAGACAGGCAATTGGCAAAGAACCTTTCGTTTCTTTTCCAAGGACCAGTGACAGCCCTGTACAATGGATTCAATTACTCCATGCTTTAGATCCTCAAGAATTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAGTTTTGCTCCCCTATTAACTATAGAAGACATATACGTGTATATCATCGGTTGAAAAAGCTTGATAAGGATTTTACAAAAACTAGGGATCTTTTAGGAGCATATTGGGATAAGCTCTCTGTAGAAGAAGCAAAGAAAGTTGTATCATTTGAAAATGTGGTGCTGGAGGAAGTTCCAGGTTCTTCAATTTTAAAATCTCTGACAACTCTTATTCAAAATCAAGGATTTTATTCACTTCCTCAGTATTATCTGATGGCTGGTGCTGCCCTTTTGGATATTGTTCAATCTAGACCTTCCAGTTTTCCTATATCTTCCCTGGAGTTGTTCAGTGTCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACAGCAGTGTCAATGCAAAGATTTGTATTTGATGGAGAGGCTGCCAAAATTGGTCTTGAACCAAAAAATCTAGTTGCTTGTACAAGTTTCTTGCTAGAACAGAATTTGGTGAAGGCATGGCTTGCTGACAAGGATGCCGAAGCACTGAGGTGCCAGAAGCAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGATATTATGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAGGAACAGAAAGCTAGGGAACAAAGAGACAAAGCTGAGGCAGAAATTAAAGGCAGTATTGACAGTACTGTAAAGGCTTTATCACAGGCAGAAGCATCTTTAGATACATACAATTTTGAAGCTCATAATCCAAATGCATTTGTCGAAAACACAGATTCACATGTACCTTTCCAATGCCCGGACACCAATGAAGAAATAAATGGGGATGTTCATTCAGAGTATGATTCTGTCACTGATCAGAATATTGAGAGACGATCAGTGCATGGACATAAAAATCAGCGTCCAGCAGTTGCCAGACAACAGGGGCTGCCAAAATCACAATGGGCTGTAGCCAATGGTTTGCATACAAACCAGAATTCTCCAATGTCAAAACTTGAAGTCATTCAGAAATATGGAACCCACTGTGATCAAAAGGCATCTGCTATAGCTAATGGCAGTAAAGTTTGGAGTCGAAAGCCAAAAACAGAAATTGACAAGGTGGTTTCAAAATTTATAAAAGAGAAAGAATCAGACGAAGTTAAGAGTCAAGAAGTTTTGATTGGATCTATATCTGTTAATCTCAGTAATGTGGTGGCTTCTCAAGAGGACTGCATGGTTGAGAATGTGACCAAGCAGAACAGTTCTCGGGACAAGCCAATAAAAACTGATTTTGTAATGAGTGGCAACAATCGCCCAACGGTTAGGCTTTGGAGGCCAGTTAGCCGGCTTGAAAATAAAGATCCCTTTCCAGTTCAAAGTGGTGGGGCAGAAGTTGATGCAGTTCATGGAAATGGTCAGAACTTGTCAGGTCCAAGTTCTTTAAGGGTGTGTGGTACAGATGATGGTGATATTGGTTTTGAAAAGTATTTTTCCCATCTAGAGGGTAGAGCGGATCCAGGAAGCTTCCAGTTCTCCACCCATGCTGCAAAAGCTTTTCTTGCACAAAGATGGAAAGAAGCCATCTCATCAGAGCATGTGAAATTGGTTGTTTCCCATGACTCAGAACCTTCTGGGTGCCAGGAGGAGATACAGGATTCTAAGTTAACAGCAAGTCAATCTTCCGATGTGGATAGAAGCAACATAGCAGCAAATGCAGATAACAGAGTTCCTAAATCCAAACCAAGATTGAAGAAGTCTGAAAAGGGGACGAAGATAAATGACGATTCA 2496 0.4175 LIHSKINIAAPPNFDNWADGEYEKHLYKTQQVWNGNGQTSKVMSMETGWKKICATRNWLEMMCGGGKWPETEVRLWKSHQRELATTMNRFAIGIIDAAASCHNALRWCHSAAIEYFCLHTPTATAEEEENMPRGGVIKILPLEQSSPHNPLCILARFQEQQAEPYSDLMPIAKLKASGTPDVKTEEKIDTIIRQAIGKEPFVSFPRTSDSPVQWIQLLHALDPQEFPGWPLLSPVKVQLQKCDKCSREFCSPINYRRHIRVYHRLKKLDKDFTKTRDLLGAYWDKLSVEEAKKVVSFENVVLEEVPGSSILKSLTTLIQNQGFYSLPQYYLMAGAALLDIVQSRPSSFPISSLELFSVLDDASEKTCLCGTAVSMQRFVFDGEAAKIGLEPKNLVACTSFLLEQNLVKAWLADKDAEALRCQKQLVEEEEAAQKRQADIMERKRQKKLRQKEQKAREQRDKAEAEIKGSIDSTVKALSQAEASLDTYNFEAHNPNAFVENTDSHVPFQCPDTNEEINGDVHSEYDSVTDQNIERRSVHGHKNQRPAVARQQGLPKSQWAVANGLHTNQNSPMSKLEVIQKYGTHCDQKASAIANGSKVWSRKPKTEIDKVVSKFIKEKESDEVKSQEVLIGSISVNLSNVVASQEDCMVENVTKQNSSRDKPIKTDFVMSGNNRPTVRLWRPVSRLENKDPFPVQSGGAEVDAVHGNGQNLSGPSSLRVCGTDDGDIGFEKYFSHLEGRADPGSFQFSTHAAKAFLAQRWKEAISSEHVKLVVSHDSEPSGCQEEIQDSKLTASQSSDVDRSNIAANADNRVPKSKPRLKKSEKGTKINDDS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4797g00001 832 MobiDBLite consensus disorder prediction 775 832 - -
Mupr4797g00001 832 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 169 827 - -
Mupr4797g00001 832 Coils Coil 416 467 - -
Mupr4797g00001 832 MobiDBLite consensus disorder prediction 535 554 - -
Mupr4797g00001 832 ProSiteProfiles Zinc finger C2H2 type domain profile. 240 268 IPR013087 -
Mupr4797g00001 832 ProSitePatterns Zinc finger C2H2 type domain signature. 242 263 IPR013087 -
Mupr4797g00001 832 MobiDBLite consensus disorder prediction 784 804 - -
Mupr4797g00001 832 MobiDBLite consensus disorder prediction 696 717 - -
Mupr4797g00001 832 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4797g00001 Mupr-Chr4797 1667 11709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4797g00001 186 828 C2H2 Transcription Factor Family AT4G25610 42.178 1.13e-142 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4797g00001 None None None