Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4796g00001 ATGGCGAAGCAGCAAACACAGAAAAACAATGTAAGCGCTAACAATAACCTTAACGCAACTAACACTGTCACCACCAAGGCGAAACGAACAAGGAGAAGTGTCCCGAGAGATTCCCCACCTCGACGCAGCTCAATATACAGAGGAGTCACTAGGCACCGATGGACAGGCCGATACGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAGTCACAGAACAAGAAAGGACGACAAGGTGCTTATGATGATGAAGAGGCCGCAGCACATGCTTATGATCTAGCAGCATTGAAATACTGGGGTCAAGATACTATTCTTAATTTTCCGTTAGCGACCTACCAGAATGAACTGAAAGAAATGGAGGGTCAATCTAGGGAGGAGTATATAGGGTCATTAAGAAGGAAAAGCAGCGGTTTTTCTCGTGGAGTTTCTAAATACAGAGGTGTTGCAAGACACCATCATAATGGAAGATGGGAGGCTCGGATTGGCAGGGTTTTTGGCAACAAATATCTTTACCTCGGAACTTATGCAACCCAAGAAGAAGCTGCCACAGCATATGACATGGCAGCTATTGAATATCGAGGACTCAACGCTGTCACCAATTTCGACCTCAGCCGCTATATCAAGTGGCTTAAGCCCAATAACAACAATAACATAATCAACTCTAATCTTTTTGACTGTAACACTAATTGTGAGACCAAATTCACCCCAAATCTTAAACAAGAACAAGGATTTAATATTTTGCACAGTCAAGAATCATTCAATAATGAAGAAGCAATACTGACTCAGCCTCGGCCAGCTGCTGCCACGTCAGCCCTAGGATTGTTGCTTCAGTCATCCAAGTTTAAGGAGATGATGGAGATGACATCTGCCGTGGATTTGTCGACACCGCCGCCGGAGTCTGAATTGCCGCCGTGCACATTTCCGGATGACATTCAAACATACTTTGAATGTGAAGATTCCAATAGATATGGAGAAGGGGATCATATCATGATCAGTGAGCTCAACAGCTTTGTGCCCCCAATTTTCCATTGTGATGACTTTGAGGCTTAG 1050 0.4419 MAKQQTQKNNVSANNNLNATNTVTTKAKRTRRSVPRDSPPRRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPLATYQNELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNNIINSNLFDCNTNCETKFTPNLKQEQGFNILHSQESFNNEEAILTQPRPAAATSALGLLLQSSKFKEMMEMTSAVDLSTPPPESELPPCTFPDDIQTYFECEDSNRYGEGDHIMISELNSFVPPIFHCDDFEA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4796g00001 349 Gene3D AP2/ERF domain 143 204 IPR036955 GO:0003700|GO:0006355
Mupr4796g00001 349 Gene3D AP2/ERF domain 45 110 IPR036955 GO:0003700|GO:0006355
Mupr4796g00001 349 CDD AP2 143 204 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 225 - -
Mupr4796g00001 349 FunFam AP2-like ethylene-responsive transcription factor 44 110 - -
Mupr4796g00001 349 SUPERFAMILY DNA-binding domain 143 204 IPR016177 GO:0003677
Mupr4796g00001 349 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 SUPERFAMILY DNA-binding domain 44 109 IPR016177 GO:0003677
Mupr4796g00001 349 Pfam AP2 domain 45 100 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 Pfam AP2 domain 143 194 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 ProSiteProfiles AP2/ERF domain profile. 45 108 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 MobiDBLite consensus disorder prediction 1 48 - -
Mupr4796g00001 349 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 PRINTS Ethylene responsive element binding protein signature 184 204 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 MobiDBLite consensus disorder prediction 1 28 - -
Mupr4796g00001 349 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 SMART rav1_2 45 114 IPR001471 GO:0003700|GO:0006355
Mupr4796g00001 349 FunFam AP2-like ethylene-responsive transcription factor 143 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4796g00001 Mupr-Chr4796 1422 4172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4796g00001 41 206 AP2-EREBP Transcription Factor Family AT5G57390 70.414 1.86e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr4796g00001 AP2 3.4e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4796g00001 K09285 - gmx:100795869 563.918