Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4790g00004 ATGGCTACTGCCCAAATGCCAACCAGAAAACTTACTCCAGACTCACAATTTATGACATTCACGATGGATAAATTTCTGATCGAGATGGAAAGGGAGAAGTCAATCAGGTTTACTGGATTGCAACTGAAAACTACTCTTACTTGTTGGGGTCAGGAGTCTATAAGGGAATTTTTTAGTGACGGAACCATTGTGGCTGTGAAGGTTCTACATGGGCGTTCTGACAAGAAAATTGAGGAGCAGTTTATGGATCAAGTGGGGACAATTGGCAAAGTTCAATACTTCAATCTGCGCTGGTTTATGAATACATGGGGAATGGCTCTCTTGACAAGTATGTTTCATGAGAACAAGACCTTAGGATTTGAAAGGCTTCATGAGACTGTGATGTTTATGAGAAGAAACCTTGACATTGAACTTCTTGAGAGCCAGAGGTTTCCAATGTGGGTTTGGAGAAGATTTGAAGGTGGAGAATTTGAGGAGTTGATAGTAGCATATGGGATAGAGGAGAAAAATAAGGAGGTGACTGACAGAATGGTCAATGTAGCTCTATCTTGTGTTCAGAATAGGCCAGATTCAAGGCCTAAAATTAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTGGAAGTTCCAAAACCTTTGAACCCATTTCAGCAATTTATGGATGCGAATTTCACTGCTCATCCAGTCCAAGTGCCACTGACCTACACTACAGATAGTGGTTCTTCTGTTGTGGCAACTGACTCTAGCATTATACATGCTACTCCTATTGTGGTTGCAGTAGTAGTCAAGGTAGTTATTATAATATATGTGTGCCAGAAAAGAAATAATGTTCATAGTAGATCAGATTCACAATTTATGACACTCACTATGGATAAATTTCTGAATGACATGGAAAGGGAGAAGCCAATCAGGTTTACTGATCAGCAGCTAAGGATTGCAACTTGTAACTACTCTAACTTGTTGGGGTCAGGAGGTTTTGGAGCAGTTTATAAGGGAGATTTTGGTAATGGGACCTTAGTTGCTGTGAAGGTTCTACATGGGAGTTCAGACAAGAAAATCGAGGAGCAGCTTATGGCAGAAATGGGTACAATTGGCAGAATTCATCATTTCAATCTGGTTCGGCTCTATGGATTTTGCTTTGAAAGAAACTTGATAGCATTGGTTTATGAGTACATGGGAAATGGCTCTCTTGATAGGTATTTGTTCCATGAAAAGAACGCCTTAGGATATGAAAAGCTTCATGAGATTGCAGTAGGGACAGCCAGAGGCATTGCTTATTTGCATGAAGAATGCCAACAAAGAATAATCCACTATGACATCAAACCAGGAAATATTCTCTTGGACAGAAACTTCAATCCTAAAGTTGCTGATTTTGGTTTAGCCAAGCTTTGCAACAGGGAAAATACTCATCTATCCATGACAAGTGGTAGGGGGACTCCTGGTTATGTTGCACCTGAACTTTGGATGCCTAATTTTCCCGTGACTCACAAGTGTGATGTTTACAGTTTTGGAATGCTGTTATTTGAAATCATAGGCAGGAGAAGAAACCTTGATATTAAACTTGCTGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAAAAAAATTGATACTGGACTACCGCAGGAGTTAATAATAGACTGTGAGATAGAGAAGATAAGTGAAGACATTGTAGAAAGAATGGCCAAGGTAGCTTTGTGGTGTGTTCAATGTAGGCCAGAATTAAGGCCCATAATGAGCGTTGTGGTGAAAATGCTGGAAGGTTCAGTGGAAATTCCAGAACCTATGAACCCATTTCAGCACTTGATGGGTGGGACTTTCGTTGTTCATCCAGTCCAAGTGTCACAAACAAGTATTTCGTCTGGTTCTTCTGTTATGGTAACAGATTCCAGCATTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTAGCCTCTACCAATATTTTGGTGGCTAAATGGCTTAGCCACTAA 1977 0.4031 MATAQMPTRKLTPDSQFMTFTMDKFLIEMEREKSIRFTGLQLKTTLTCWGQESIREFFSDGTIVAVKVLHGRSDKKIEEQFMDQVGTIGKVQYFNLRWFMNTWGMALLTSMFHENKTLGFERLHETVMFMRRNLDIELLESQRFPMWVWRRFEGGEFEELIVAYGIEEKNKEVTDRMVNVALSCVQNRPDSRPKISDVVKMLEGSVEVPKPLNPFQQFMDANFTAHPVQVPLTYTTDSGSSVVATDSSIIHATPIVVAVVVKVVIIIYVCQKRNNVHSRSDSQFMTLTMDKFLNDMEREKPIRFTDQQLRIATCNYSNLLGSGGFGAVYKGDFGNGTLVAVKVLHGSSDKKIEEQLMAEMGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHEKNALGYEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRENTHLSMTSGRGTPGYVAPELWMPNFPVTHKCDVYSFGMLLFEIIGRRRNLDIKLAESQEWFPMWVWKKIDTGLPQELIIDCEIEKISEDIVERMAKVALWCVQCRPELRPIMSVVVKMLEGSVEIPEPMNPFQHLMGGTFVVHPVQVSQTSISSGSSVMVTDSSIVCATPIMRKYEIELASTNILVAKWLSH 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4790g00004 658 ProSiteProfiles Protein kinase domain profile. 314 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4790g00004 658 Gene3D Transferase(Phosphotransferase) domain 1 125 217 - -
Mupr4790g00004 658 SUPERFAMILY Protein kinase-like (PK-like) 298 586 IPR011009 -
Mupr4790g00004 658 Pfam Protein kinase domain 318 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4790g00004 658 Gene3D Transferase(Phosphotransferase) domain 1 391 593 - -
Mupr4790g00004 658 Gene3D Phosphorylase Kinase; domain 1 288 390 - -
Mupr4790g00004 658 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Mupr4790g00004 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Mupr4790g00004 658 FunFam Putative receptor-like protein kinase 391 593 - -
Mupr4790g00004 658 PANTHER OS07G0415500 PROTEIN 140 217 - -
Mupr4790g00004 658 SMART serkin_6 314 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4790g00004 Mupr-Chr4790 5722 14262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4790g00004 303 598 Receptor kinase-like Gene Family AT5G38280 42.244 8.26e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mupr4790g00004 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4790g00004 - - gmx:100816921 645.58