Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr478g00004 ATGCATCTCTCTCCCTTCATCCCCATCATCATTTTCAACCTATTGATCCACAGCTTCTCTCTGATTCTGGGGCAGCAACCTTACATTGGTTTAGGCACAGTAGCGTGCCCTCGAAGGGGTAACTCAAAATCTATTCGCGGTTACACTTGTAATGGCGCAAAGCATAGCTGCCAAGCCTACCTTACCTTCAGATCTCAACCCATTTACAACACAGTCTCCACAATATCTACTTTGTTGGGTTCTAACCCATCCCAGCTTGCTAAAATAAACTCCGTTTCCCTGAATGGCACCTTTGAAACAAACAAGTTGGTGCTTGTTCCGGTCAACTGTTCCTGTGCGGGTGAGTATTACCAGACAAACACATCCTATGTGTTCCAGAACTCAGAAACTTATTTATTGATTGCTAACAACACTTTCGAGGGCCTCACAACGTGTCAAGCGTTGGAGCATGAAAACCCCAACCCTGCAGATATATACCCCGGAAGGAAACTCGTAGTGCCTCTTAGATGTGCTTGTCCCACAAAGAACCAAACCGATAAAGGCATCAGGTACCTCTTAAGTTACCTTGTTAACTGGGGTGATTCTGTTTCACTCATAAGTGAGAAATTTGGTGTCAACACTATGACTACCCTTGAAGCTAATACCCTTACTTTGACATCCATTATCTACCCCTTTACCACACTTCTTATTCCCCTTCATGATAAGCCCTTAAGTTCTCAAACCGTTTCGCCAGCTCAACGCACTCCACCACCCTCACCTCCCTCTTCTGATCATGGCTCAAACAAAACATGGGTATATGTAGTTGTTGGAGTTATTGTAGGAGCTGTTGCCTTAATGTCAGTTCTTTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATAAAAACAAAGATGATTCGGTTTCGGTGGTAATTGAGGCAATTGAGAAAAAACCAAAAGGTGAAGTAAATGAGAAATTGTCAGAGATCATATCTGGCATAGCTCAATCTTTCAAAGTGTATGGTTTTGAGGAACTGCAGCGTGCAACAAATAACTTTAGTTCTAGCTGCTGGATCGAAGGGTCTGTTTATCGCGGTGTTATTAATGGAGATCCATGTGCAATTAAAAAGGTAGAAGGAGATGTGTCAAAAGAGATAGAGATACTGAACAAAATAAACCACTCCAATGTTATACGCCTCTCTGGGGTTAGCTTCCACGAGGGGCGTTGGTACCTTGTCTATGAGTATGCTGCTAATGGAGCCTTAAGTGAATGGATCTACTTCAACAACGTGGATGGGAAGTTTCTGAGTTGGACGCAGAGAATGCGAATTGCATTGGATGTGGCCACAGAACTTGACTATCTTCACAGTTTCACTTCTCCTCCTCATGTCCACAAGGATATTACGAGTGGTAGCATTCTTCTGGATGGTGAATTCAGGGGAAAGGTTGCAAACTTGAGCCTTGCTAGGTGTTTGGAAGGACCGGATGATCAATTTCCTGCCACTAGGCACATTGTTGGGACAAGAGGCTATATGGCTCCAGAGTATTTGGATAATGGTCTTGTGTCTACAAAGCTTGATGTGTATGCTTTTGGGGTGCTCATGCTGGAAATGCTCACTGGGAAAGAGGTTGCTGCTATTTTAACCCAAGATGAGACAAACTTGTCACATGTTTTAAGTGTTGTACTTGGTGAGGAGAGGTTGGAGGAGTTTATTGATTCCTCTTTGCGAGAAAATTGTCCATTGCAACTTGCTATGTTTGTGATTGAAATGATTGATAATTGCATAACGACAGATCCGGCAAGTCGCCCTAATGACGATTAG 1803 0.4321 MHLSPFIPIIIFNLLIHSFSLILGQQPYIGLGTVACPRRGNSKSIRGYTCNGAKHSCQAYLTFRSQPIYNTVSTISTLLGSNPSQLAKINSVSLNGTFETNKLVLVPVNCSCAGEYYQTNTSYVFQNSETYLLIANNTFEGLTTCQALEHENPNPADIYPGRKLVVPLRCACPTKNQTDKGIRYLLSYLVNWGDSVSLISEKFGVNTMTTLEANTLTLTSIIYPFTTLLIPLHDKPLSSQTVSPAQRTPPPSPPSSDHGSNKTWVYVVVGVIVGAVALMSVLCAVIFFTRYRKNKNKDDSVSVVIEAIEKKPKGEVNEKLSEIISGIAQSFKVYGFEELQRATNNFSSSCWIEGSVYRGVINGDPCAIKKVEGDVSKEIEILNKINHSNVIRLSGVSFHEGRWYLVYEYAANGALSEWIYFNNVDGKFLSWTQRMRIALDVATELDYLHSFTSPPHVHKDITSGSILLDGEFRGKVANLSLARCLEGPDDQFPATRHIVGTRGYMAPEYLDNGLVSTKLDVYAFGVLMLEMLTGKEVAAILTQDETNLSHVLSVVLGEERLEEFIDSSLRENCPLQLAMFVIEMIDNCITTDPASRPNDD 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr478g00004 600 CDD LysM 187 230 IPR018392 -
Mupr478g00004 600 Gene3D Transferase(Phosphotransferase) domain 1 410 599 - -
Mupr478g00004 600 Pfam LysM domain 188 231 IPR018392 -
Mupr478g00004 600 Gene3D Phosphorylase Kinase; domain 1 317 409 - -
Mupr478g00004 600 SUPERFAMILY Protein kinase-like (PK-like) 329 598 IPR011009 -
Mupr478g00004 600 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 598 - -
Mupr478g00004 600 SMART LysM_2 187 231 IPR018392 -
Mupr478g00004 600 FunFam PTI1-like tyrosine-protein kinase 3 410 600 - -
Mupr478g00004 600 Gene3D LysM domain 186 242 IPR036779 -
Mupr478g00004 600 Pfam Protein kinase domain 364 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr478g00004 600 ProSiteProfiles LysM domain profile. 186 230 IPR018392 -
Mupr478g00004 600 MobiDBLite consensus disorder prediction 239 259 - -
Mupr478g00004 600 ProSiteProfiles Protein kinase domain profile. 302 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr478g00004 Mupr-Chr478 11664 14137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr478g00004 9 600 Receptor kinase-like Gene Family AT2G23770 42.810 4.40e-158 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mupr478g00004 PK_Tyr_Ser-Thr 8.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr478g00004 - - gmx:100815842 1012.68