Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr478g00003 ATGGCTGTCTTCTTTCCTTTTCTTCCTCTCCTTTCCAAGATTCTTTGTCTTGCACTCATGTTGTTTTTCACTAATATCACAGCTCAATCACAACACACCAATGGAACAAACTTTTCATGCCCTTCTGATTCACCTCCTTCATGTAAAACCTATGTAGCATACATTGCCCAGTCTCCAAATTTTTTGAGTCTGACCAGCATATCCAACATATTTGAAACAAGTCCTTTATCCATTGCAAGAGCCAGTAACTTAGTGCCCGAGGAAGACAAGCTGATTCCGGGCCAAGTCTTGCTGATACCTGTAACTTGTGGTTGCACTAAAAACCGCTATTTTGCCAATATCTCCTATGAGATCAACCCGGGTGATAGCTTCTTCTTTGTTGCAAGAACTTCATACGAGAATCTCACGAATTGGCGTGTAGCGATGGATTTAAACCCCGGTCTAAATCCATATGTGTTGCCAGTAGGCATCCAAATAGTGTTTCCTTTATTCTGCAAGTGCCCTTCAAAGAACCAGTTGGACAAAGGGATAGAGTACCTAATTACTTACGTGTGGCAGCCCAGTGACACTGTTTCCCTTGTAAGTCACAAGTTTGGTGCATCACCAGAGGACATATTGAGTGAAAACAACTATGGTCAAAACTTCACTGCTGCAAACAACCTTCCAGTTTTGATCCCAGTTACAAGCTTGCCAGTTCTTGCAAAACCTCTTTCAGTTGGAAGGAAACACAGAATTCTTCTTCCGAGTTTGAATAGGAGTGCTTCATCAGCTGAAACTGCAGATAAGCTACTTTCTGGAATTTCAGGCTATGTGAGTAAGCCTACCGTGTATGAAACCGATGCAATCATTGAAGGTACCATGAACCTCAGTGAGCAGTGTAAGATTGGGGAATCAGTGTACAAGGCAAACATAGAGGGTAAGGTTTTGGCAGTAAAAAGATTCAAGGAAGATGTCACTGAGGAGCTGAAGATTCTGCAGAAGGTGAATCATGGAAATCTGGTGAAACTAATGGGTGTGTCATCAGACAATGATGGGAATTGTTTCGTGGTTTATGAATATGCTGAAAATGGGTCTCTTGATGAGTGGCTATTCTCCAAGTCTTCTTCAGACACATCAAACTCCATGGCTTCCCTGACATGGTGTCAGAGGATAAGCATAGCAGTGGATGTTGCAATGGGTCTGCAGTACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACAAGCAGTAATATCCTTCTTGACTCCAACTTTAAGGCCAAGATAGCAAATTTCTGCATGGCCAGAACTTTTACCAACCCCATGATGCCAAAAATAGATGTCTTTGCATTTGGGGTGATTCTGATAGAGTTGCTTACTGGCAGGAAAGCCATGACAACAAAAGAAAATGGTGAGGTGGTTATGCTGTGGAAGGACATTTGGAAGATCCTAGATCAAGAAGAGAATAGAGAGGAGAGGCTCAGAAAATGGATGGATCCTAAGTTAGAGAGTTATTATCCTATAGATTATGCTCTCCGCTTGGCCTCCTTGGCAGTGAATTGTACTGCAGATAAGTCTTTGTCCAGACCAACCATTGCAGAAATTGTCCTTAGCCTCTCCCTTCTCACTCAACCTCCTTCCGCCACATTAGAGAGATCCTTGACTTCTGGATTAGATGTAGAAGCTGCTCAAACTGCCACTTCCATAGCAGCTCGTTGA 1707 0.4277 MAVFFPFLPLLSKILCLALMLFFTNITAQSQHTNGTNFSCPSDSPPSCKTYVAYIAQSPNFLSLTSISNIFETSPLSIARASNLVPEEDKLIPGQVLLIPVTCGCTKNRYFANISYEINPGDSFFFVARTSYENLTNWRVAMDLNPGLNPYVLPVGIQIVFPLFCKCPSKNQLDKGIEYLITYVWQPSDTVSLVSHKFGASPEDILSENNYGQNFTAANNLPVLIPVTSLPVLAKPLSVGRKHRILLPSLNRSASSAETADKLLSGISGYVSKPTVYETDAIIEGTMNLSEQCKIGESVYKANIEGKVLAVKRFKEDVTEELKILQKVNHGNLVKLMGVSSDNDGNCFVVYEYAENGSLDEWLFSKSSSDTSNSMASLTWCQRISIAVDVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFCMARTFTNPMMPKIDVFAFGVILIELLTGRKAMTTKENGEVVMLWKDIWKILDQEENREERLRKWMDPKLESYYPIDYALRLASLAVNCTADKSLSRPTIAEIVLSLSLLTQPPSATLERSLTSGLDVEAAQTATSIAAR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr478g00003 568 Gene3D Phosphorylase Kinase; domain 1 287 355 - -
Mupr478g00003 568 ProSiteProfiles LysM domain profile. 52 99 IPR018392 -
Mupr478g00003 568 SUPERFAMILY Protein kinase-like (PK-like) 292 536 IPR011009 -
Mupr478g00003 568 Gene3D Transferase(Phosphotransferase) domain 1 437 549 - -
Mupr478g00003 568 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 258 540 - -
Mupr478g00003 568 ProSiteProfiles Protein kinase domain profile. 257 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr478g00003 568 Pfam Protein tyrosine and serine/threonine kinase 314 435 IPR001245 GO:0004672|GO:0006468
Mupr478g00003 568 Gene3D Transferase(Phosphotransferase) domain 1 356 436 - -
Mupr478g00003 568 ProSitePatterns Tyrosine protein kinases specific active-site signature. 405 417 IPR008266 GO:0004672|GO:0006468
Mupr478g00003 568 FunFam Os07g0541700 protein 354 444 - -
Mupr478g00003 568 Pfam LysM domain 63 100 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr478g00003 Mupr-Chr478 5933 7729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr478g00003 78 538 Receptor kinase-like Gene Family AT3G21630 28.598 1.28e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mupr478g00003 PK_Tyr_Ser-Thr 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr478g00003 - - gmx:100301877 979.163