Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4788g00003 ATGGGGTTGATAAAAGCAGCCATTGGAGATGCAATTTTGACATCCATATGGGTTTTCATTATCTCAACTTTGAGGATTGTCACAACTGAGGTAGCACTTTTCCTTGGTCTCCAACCTTTCTCACTTGCAGGCCTAGTCATCACCACCATCCTAAACACCCTCTATGTCCTCACCATAAGCTTCATTGGAAGGGCCTTAGGTGGTGCCAGCTTCAACCCTTCAACCACTGTTTCCTTCTACACTGCAGGGCTCAGGCCTGACTCATCCCTTACATCAATGGCTGTGAGGTTCCCTGCTCAGGCAGCTGGTGGGGCTGTTGGTGCCAAGACTCTTCTTCTAGTGGTGCCAGCTCAGTACAAGGACATACTGAAGGGGCCTTTCTTGAAGGTGCACTTGCACACTGGTGCTATGGCTGAGGGGCTGTTGACTTTCACTCATAGCTTGGCTATCCTATTTATCATGCTCAGGGGTCCTAAAAACCCTTTTCTGAAGGTGTATTTGCTTTCTGTGGCTACTGTGGCTTTGGTTATTACAGGTGCTGGGTTCACTGGGCCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTATCAACAACAAGCACAACACTTGGGAGCAGTTTTATGTCTATTGGATATGTCCATTCATAGGGGCCACCTTAGCTGCTTTGATATACCGCTCTCTATTTATGTCGCCGATCAAGCACAAGAAAGCTTAG 720 0.4792 MGLIKAAIGDAILTSIWVFIISTLRIVTTEVALFLGLQPFSLAGLVITTILNTLYVLTISFIGRALGGASFNPSTTVSFYTAGLRPDSSLTSMAVRFPAQAAGGAVGAKTLLLVVPAQYKDILKGPFLKVHLHTGAMAEGLLTFTHSLAILFIMLRGPKNPFLKVYLLSVATVALVITGAGFTGPSMNPANAFGWAFINNKHNTWEQFYVYWICPFIGATLAALIYRSLFMSPIKHKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4788g00003 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr4788g00003 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr4788g00003 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr4788g00003 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr4788g00003 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr4788g00003 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Mupr4788g00003 239 Gene3D Glycerol uptake facilitator protein. 1 237 IPR023271 -
Mupr4788g00003 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr4788g00003 239 SUPERFAMILY Aquaporin-like 2 233 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4788g00003 Mupr-Chr4788 11853 12572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4788g00003 1 230 Major Intrinsic Protein MIP AT3G04090 45.652 4.53e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4788g00003 K09875 - gmx:100797126 403.675