Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4785g00003 ATGCACCACTTTGCCATGGACAACTCTCACATCCTCCAATTCCTTCCCAACACCACCCCCTCCACCACCAACAACCCCTTCTTCCATGCTGCACCACATACCACCACCAACATCATGCACCATACCACCCTCTCTACTAATTCCTCCAACACTTACTACCCCTTCCATCTCTCTCAAATTACCGAAACACCCTCCCACCAAGATAGAGCCCTTGCTGCTATGAAGAACCACAAGGAAGCTGAAAAGAGGAGGAGGGAGAGAATCAACTCCCACCTCGACGAGCTTCGCACTCTTCTTCCTTGTAATTCCAAGACAGACAAGGCTTCGCTTCTGGCGAAGGTTGTCCAGCGAGTCAAGGAGCTGAAGCAGCAAACCTCGGAAATCACCGAACTCGAGACGGTTCCGTCGGAGACTGACGAGATCACGGTGCTCTCCACCGGCGGTGACTACGGTGGCGACGGAAGGCTCATATTCAAGGCCTCTTTGTGCTGCGAGGACCGCTCCGACCTCATCCCCGACCTCATAGAAATCCTGAACTCGCTTCACCTGAAAACCCTCAAAGCGGAAATGGCCACGCTCGGAGGAAGAACACGCAACGTTCTCGTCGTCGCTGCTGATAAAGAACACAGCATTGAATCCATCCATTTCCTTCAGAACTCGCTCAAGTCCTTGCTAGACCGATCCAATTCAAGCGACCGGTCAAAACGACGCCGTGGTTTAGACCGAAGACTGATGTCTTAA 741 0.525 MHHFAMDNSHILQFLPNTTPSTTNNPFFHAAPHTTTNIMHHTTLSTNSSNTYYPFHLSQITETPSHQDRALAAMKNHKEAEKRRRERINSHLDELRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSTGGDYGGDGRLIFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAADKEHSIESIHFLQNSLKSLLDRSNSSDRSKRRRGLDRRLMS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4785g00003 246 Gene3D - 67 133 IPR036638 GO:0046983
Mupr4785g00003 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Mupr4785g00003 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 129 IPR036638 GO:0046983
Mupr4785g00003 246 CDD bHLH_AtAIG1_like 67 143 - -
Mupr4785g00003 246 Coils Coil 78 98 - -
Mupr4785g00003 246 SMART finulus 78 127 IPR011598 GO:0046983
Mupr4785g00003 246 MobiDBLite consensus disorder prediction 228 246 - -
Mupr4785g00003 246 PANTHER TRANSCRIPTION FACTOR BHLH30 41 240 IPR045847 GO:0003700|GO:0006355
Mupr4785g00003 246 FunFam transcription factor bHLH30 67 130 - -
Mupr4785g00003 246 MobiDBLite consensus disorder prediction 227 246 - -
Mupr4785g00003 246 Pfam Helix-loop-helix DNA-binding domain 76 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4785g00003 Mupr-Chr4785 47930 49092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4785g00003 52 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 71.038 3.87e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr4785g00003 HLH 4.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4785g00003 - - gmx:100802566 370.933