Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4784g00001 ATGTTGCAGGATGTTATCCACCCCCCAACACCGGCTGAGCAACACCCCATTTTTATGGTAAACATGTTGTTCACAATGCTCATTTGTCACCACTCACTGCAGGATGAGATTTCAAGCCCAATTAGTGCTCGAATTTTCGAACTTTGTGACCCTGATTTCTTCCCAGAGACACTGCAAAATTCTGAGGTTACCTCCAGCTCAAACTGTTGCCATGAAGGGAAGTCCTCATATGCCACAACCATATCACCACCTTTGGATGTAGTAGACAACAACAACAAGATCAATACTAATAGCAACATAGTCACCACCTCATCTAGTACTACTACAACCAGTACCACTACCAACAACAACATAAACAACAATAACAACAACAACGTGACAAACAGCAATAACCTGTCTATCTTCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCAGCCTCCATAGACTTCTCCTCATCTCCATCTTTTGTTGTTCCACCACTTCTCCCAATCACAACACCGCAGGAGCAGTTTGATTTCTCTTCAGCAGGCTCAGTTTTGAAGGGCCTCTCTCATCAGTACACCACTGACCCTGTGGTTGCACCTCTTATGGGGGCTCCATTACCATCTGTTTTTGATGATGATTGCATATCTTCCATCCCTTCTTATGTGACTCTCAACCCCTCATCTCCCACTGGCTCTTATCTCAACCCTGGCATAGGAGTGTACATGCCTCCTGGTTCCCTTCACACTGCCTTATCTGCTGACAGTGCTGGATTGTTTGGTGGGAACATTCTACTGGGGTCTGAACTGCAGGCACAGGAACTGGACTACCAAGGAGAAAATGGTGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAACCCCCAAGAGCTTCAGGCACTTGGAAATGAGAGTCAGAAACTTGTAACTGGGGCTGGAAGTTCTGCCGCTTTGGCACCAGAAATCTCACACTTGGAGGACTCTACCTTAAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCTGATAGCCGGCCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGGGCCATAGACAAGGAAGTAGCAATCATGAAGAGGATGATGAAGAAATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGGGTGAACTCTTTCAAATGCAACTATTCCATCCAATCCTTGATTTGA 1308 0.4381 MLQDVIHPPTPAEQHPIFMVNMLFTMLICHHSLQDEISSPISARIFELCDPDFFPETLQNSEVTSSSNCCHEGKSSYATTISPPLDVVDNNNKINTNSNIVTTSSSTTTTSTTTNNNINNNNNNNVTNSNNLSIFFDSQEEIDNDISASIDFSSSPSFVVPPLLPITTPQEQFDFSSAGSVLKGLSHQYTTDPVVAPLMGAPLPSVFDDDCISSIPSYVTLNPSSPTGSYLNPGIGVYMPPGSLHTALSADSAGLFGGNILLGSELQAQELDYQGENGGGIYCTDSIQRVFNPQELQALGNESQKLVTGAGSSAALAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEGHRQGSSNHEEDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4784g00001 435 ProSiteProfiles CCT domain profile. 338 380 IPR010402 GO:0005515
Mupr4784g00001 435 MobiDBLite consensus disorder prediction 373 398 - -
Mupr4784g00001 435 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 207 396 IPR045281 GO:0009909
Mupr4784g00001 435 MobiDBLite consensus disorder prediction 99 124 - -
Mupr4784g00001 435 MobiDBLite consensus disorder prediction 373 399 - -
Mupr4784g00001 435 Pfam CCT motif 338 380 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4784g00001 Mupr-Chr4784 3278 7535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4784g00001 317 385 C2C2-CO-like Transcription Factor Family AT5G24930 40.580 2.43e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr4784g00001 CCT 5.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4784g00001 - - gmx:100793417 615.92