Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4782g00002 ATGGGGAAAACACGTGGTATGGGAGCTGCTCGCAAGTTGAAGTCTCACCGAAGAAGGCAGAGGTGGGCTGACAAATCATACAAGAAATCACATCTTGGAAATGAATGGAAGAAGCCATTCGCTGGATCGTCCCATGCAAAAGGCATTGTTCTTGAAAAAATTGGGATTGAGGCTAAGCAACCAAACTCTGCCATTAGAAAATGTGCTCGAGTACAATTAATCAAAAATGGAAAGAAGATTGCAGCTTTTGTGCCAAATGATGGTTGCTTGAACTATATTGAAGAAAACGATGAAGTTCTTATTGCTGGTTTTGGCCGAAAAGGGCATGCAGTTGGAGATATTCCTGGAGTCCGATTTAAGGTTGTGAAGGTATCTGGGGTGTCTCTTCTCGCCCTCTTCAAAGAGAAGAAGGAGAAGCCTAGATTATTTTAA 432 0.4236 MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRLF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4782g00002 143 CDD Ribosomal_S23 26 139 IPR005680 GO:0003735|GO:0006412|GO:0015935
Mupr4782g00002 143 ProSitePatterns Ribosomal protein S12 signature. 59 66 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr4782g00002 143 MobiDBLite consensus disorder prediction 9 25 - -
Mupr4782g00002 143 Gene3D - 25 142 IPR012340 -
Mupr4782g00002 143 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr4782g00002 143 FunFam 40S ribosomal protein S23 25 142 - -
Mupr4782g00002 143 NCBIfam 30S ribosomal protein S12 6 141 IPR005680 GO:0003735|GO:0006412|GO:0015935
Mupr4782g00002 143 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 16 143 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr4782g00002 143 MobiDBLite consensus disorder prediction 1 30 - -
Mupr4782g00002 143 Pfam Ribosomal protein S12/S23 31 141 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mupr4782g00002 143 SUPERFAMILY Nucleic acid-binding proteins 20 141 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4782g00002 Mupr-Chr4782 11796 13952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4782g00002 1 141 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 95.745 1.56e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4782g00002 K02973 - rcu:8263368 285.419