Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4778g00002 ATGGCTTTCACACTAGACAGGTTTGAGGAGAATATGGTCTTCACTTTCGAGTCTCAGAAGTCAGTGCCAGCACCCTTCCTGACAAAGACATACCAGCTTGTTGATGACCCTCACACTGACCACATTGTTTCATGGGGTGAAGATGAAACTACATTTGTTGTGTGGAGGCCCCCTGAGTTTGCCAGAGATCTTCTTCCTAACTATTTCAAACACAACAACTTCTCAAGCTTTGTTAGGCAACTCAACACCTATGGTTTCAAGAAGGTAGTTGCTGATAGGTGGGAGTTTGCAAATGAGTACTTCAGAAAAGGAGCTAAGCACCTTTTATGTGAAATCCACAGGAGGAAAACATCTCAGCAGCACCACCAACTCTTCCAAGACCAACCACCATCCCAGATTCTTCAGCAAGATGAAAGTCTCTGCTGGCTTGACACTCCTTTACCATCTCCAAAACCAAGCACAGACATTCTAACAGCACTTTCTGAAGACAACCAAAGGCTAAGGAGAAAGAACTTCATGCTCTTATCAGAACTCAGTCACATGAAGACTTTGTACAATGACATCATATACTTCATCCAAAACCATGTAAAACCAACACCCTTTGAGCAAAGAAGCAGCAGTGCTATTCCAAAGCTGGTGGAGTTGGACTCATTGCATGAGTCTCCAAATGACATGGGGGTTTTCAGAGCTGCCAAAAGTTGTATTATGGATAAGTCTTTCATTGCTTCTACTGAGGAATCAAACAGTTCTGTGAAGCTCTTTGGGGTCCCTCTAAGTGGCAAAAAGAGATTGCACCCAGATAACATTAATTGA 813 0.4305 MAFTLDRFEENMVFTFESQKSVPAPFLTKTYQLVDDPHTDHIVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKTSQQHHQLFQDQPPSQILQQDESLCWLDTPLPSPKPSTDILTALSEDNQRLRRKNFMLLSELSHMKTLYNDIIYFIQNHVKPTPFEQRSSSAIPKLVELDSLHESPNDMGVFRAAKSCIMDKSFIASTEESNSSVKLFGVPLSGKKRLHPDNIN 270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr4778g00002 270 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr4778g00002 270 Gene3D - 18 117 IPR036388 -
Mupr4778g00002 270 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr4778g00002 270 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr4778g00002 270 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr4778g00002 270 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 221 IPR027725 -
Mupr4778g00002 270 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr4778g00002 270 FunFam Heat stress transcription factor B-4 18 116 - -
Mupr4778g00002 270 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Mupr4778g00002 270 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr4778g00002 Mupr-Chr4778 12922 14480 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4778g00002 10 265 HSF AT1G46264 50.163 2.92e-90 270
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr4778g00002 HSF_DNA-bind 9.1e-33 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4778g00002 K09419 - gmx:100806150 520.39