Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr476g00004 TGTTGGAACACAGAAAGCACTGATCTTGACATGGATGGCAACGGGAACCCTGAAGAAAGCTTTGCAAACGGGGAAAAGAAAGAACAGAGCAAACAAAAGGAAAACGCCGAGACGGTTCCATTTCGCAAGCTGTTTGCGTTTGCTGACTCCGCCGACATTTTCTTGATGGTTGTTGGAAGCATTGGTGGCATTGGAAACGGTTTGGGGTTTCCTCTTATGACGTTACTATTTGGTCAAATAATTGACACCTTCGGTAGTAACCAGGAAAGCCCCAACCTAGTGGAAAAAGTATCGAGGGTTTCTCTTAAATTTGTATACTTGGCAATAGGATCTGGGATCGCAGCGTTCCTCCAGGTGACTTGCTGGATGGTCACAGGGGAAAGACAAGCTGCACGAATAAGGGGATTGTATTTGAAAACTATACTGAGACAAGATGTTGCTTTCTTCGACAAGGAAACAAACACTGGAGAGGTGATTGGGAGAATATCAGGTGACACGGTTCTCATTCAAGATGCTATGGGAGAGAAGGTTGGGAAATTTGTGCAGCTGATAGCAACATTCTTAGGGGGCTTTGCGATAGCATTTGCCAAAGGGTGGCTTCTAACCGTTGTCATATTGTCCATTCTTCCACTCCTAATTTTGTCAGGGGCTACTATGGCCATCATCCAAGGCAGGATGGCTTCCCGAGGTCAAGCTGCTTATGCAAAAGCTGCACGCCTAGTTGGACAGACAATTAGCTCAATAAGAACTGTTGCATCCTTTACTGGGGAAAAACAAGCAGTGTCTGATTATAGCAAATTTCTTGTAGAAGCTTACGTAACAGGCGTTCATGAAGGTTCCGTTGCTGGCATGGCCCTTGGCACAGTTATGCTTCTTGTTTTCTGTGGTTATGCTTTGGCTGTGTGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACGGTCCTTAATGTGATTGCTTCTTTGTTAACTGCTTCAGTGTCTCTTGGTGAGGCATCTCCTATCATAAGTGCTTTTGCAGCGGGTCAGGCTGCAGCATACAAAATGTTTGAAACAATTGAGAGGAAGCCAGAGATTGATGCTTATAATCCAAATGGGAAAATATTAGAGGATATTGAAGGTGAAATAGAGTTGAGGGATGTTTTTTTCAGTTATCCAGCGAGGCCTGAGGAGTTGATATTCGATGGGTTTTCTCTTGAGATTCCTAAAGGTACAAGTGCAGGATTAGTGGGACAAAGTGGGAGTGGAAAGTCTACGGTTATCAGTTTGCTAGAAAGGTTCTATGATCCACAAGCAGGTGAAGTTCTTATTGATGGCATTAACCTGAAAGAGTTTCAGCTTAGGTGGATCAGGGGGAAAATTGGCCTTGTTAACCAGGAGCCGGTGTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAGGATGAAGTGACAATTGAAGAGATAAGATCAGCATCTGAGCTTGCAAATGCTACTAAATTCATTGATAAACTGCCACAGGGATTCAACACAATGGTTGGTGAGCATGGAACTCAACTCTCTGGTGGACAGAAACAGCGCATTGCCATAGCAAGAGCAATCCTAAAAGATCCGAAAATTCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGGTCATGGTTAACCGAACTACTGTTGTTGTGGCACATCGTTTGAGCACAGTGAGGAATGCTGACATGATTGCTGTAATTCATAGAGGGAAGGTGGTTGAAAAAGGAACACACTCAGAATTACTCAAGGATTCTGACGGAGCTTACTCTCAATTGATACGTTTACAAGAAGTAAACAGTGAATCAGAAGAAACTACAAACCTTCACAACAAGAGTGTACTTTCCGCGGAATCCTCCGAACAGTTAACTGAAAAGAGGTCACTTTGGAGATCAATTAGTAGGGGATCATCTATAGGGAGTAGTAGCCGCCACTCATTTTCACTTTCCTTAGGTATACCCCAAGGAGTTAATCTCCCTGATCCTAAAGACGAAGACACATTACCCGAAGAAGAAGCACAAGAGGTTCCACTCCATCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTGTTATATTTCCCATATTTGGTGTGTTGATTTCCAGTGCCGTGAAAACATTTTATGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCACTAATGTTTGTGCTCCTTGGTCTTGCATCATTGTTGGTAATTCCAGCTCGAGCATATTTTTTTTCTGTGGCTGGATGCAAGTTAATCCAACGTATAAGGGTAATATGTTTTGAGAAAGTGATCAACATGGAGGTTGGTTGGTTTGATGAGCCCAACAACTCAAGTGGTGCCCTTAGTGCAAGGCTCTCAGCAGTTGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCACTGGGACTATTGGTCCAAAATTTAGCATGTGCCTTGGCAGGTCTGATTATTGCTTTCATTGCATGCTGGCAGCTGGCATTAGTTATTCTTGTCTTGATTCCCCTGATTGGAGCAAATGGCTATGTTCAAACGAAATTCATGAAGGGGTTCAGCAAAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAAGGATGCAGTTGGAAATATAAGAATGGTAGCTTCTTTCTGTGCTCAAGAAAAGGTCATGGAATTGTACAGGACGAAATGTGAAGACCCCATGAAAACAGGAATATGGCAAGGGTTGATCAGTGGATTAGGATTTGGGTTCTCATTTTTCTTACTATTTAGTGTCTATGCAACTATCTTCTATGCAGGAGCTAGACTTGTGGATGCGGGAGAGACATCGTTCCCAGATGTTTTTCGAGTTTTCTTTGCTTTAACTATGACATCTATTGGAGTTTCCCAATTTAGCTCAATTTCTCCTGATTCTAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATAATTGATAAGAAGTCAAAGATAGATCCAAATGATGAGTCTGGTACCACACTGGACAGTGTTAAGGGAGAAATCGAGTTTCGTCATGTGAGCTTCAAGTACCCATCTAGGCCAAAGATACAGATTTTCCGAGACCTTAGTTTGGCTATCCATTCTGGCAAAACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGCAAATCCACAGTGATTGCCTTGTTGCAGAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGACGGTATGCAAATTGGAGAGTTACAACTCAAGTGGTTTAGACAGCAAATGGGTCTTGTAAGCCAAGAGCCAGTGTTGTTCAATGACACTATTCGTGATAATATTGCTTATGGAAAGGGAGGTGATGCAACTGAAGCAGAAATCACAGCTGCAGCACAACTAGCTAATGCCCATGTGTTCATTAGTGGCTTACAACAGGGTTATGATACTGTCGTAGGAGAAAGGGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCCATTGCACGTGCTATAATTAAAAGTCCAAAGATATTACTGCTAGATGAAGCCACAAGTGCATTAGACGCTGAGTCAGAGAGAGTTGTTCAAGATGCATTGGATAAAGTCATGGTGAATAGGACTACTGTGGTTGTCTCACATCGTCTATCTGCAATTAAAAATGCAGATTTGATTGCTGTTATGAAGGATGGAGTTATAGTGGAGAAGGGAAGTCACGAAACACTCGTTAGTGTCAACGATGGATTTTATGCTTCCTTAGTCCAACTTCACACAAATGCTTCAAAAATAAGAGTTTCATAA 3849 0.4284 CWNTESTDLDMDGNGNPEESFANGEKKEQSKQKENAETVPFRKLFAFADSADIFLMVVGSIGGIGNGLGFPLMTLLFGQIIDTFGSNQESPNLVEKVSRVSLKFVYLAIGSGIAAFLQVTCWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGRISGDTVLIQDAMGEKVGKFVQLIATFLGGFAIAFAKGWLLTVVILSILPLLILSGATMAIIQGRMASRGQAAYAKAARLVGQTISSIRTVASFTGEKQAVSDYSKFLVEAYVTGVHEGSVAGMALGTVMLLVFCGYALAVWFGAKMIMEKGYNGGTVLNVIASLLTASVSLGEASPIISAFAAGQAAAYKMFETIERKPEIDAYNPNGKILEDIEGEIELRDVFFSYPARPEELIFDGFSLEIPKGTSAGLVGQSGSGKSTVISLLERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVNQEPVLFASSIKDNIAYGKDEVTIEEIRSASELANATKFIDKLPQGFNTMVGEHGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERIVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHRGKVVEKGTHSELLKDSDGAYSQLIRLQEVNSESEETTNLHNKSVLSAESSEQLTEKRSLWRSISRGSSIGSSSRHSFSLSLGIPQGVNLPDPKDEDTLPEEEAQEVPLHRLASLNKPEIPVLLIGCVAAIANGVIFPIFGVLISSAVKTFYEPFDEMKKDSKFWALMFVLLGLASLLVIPARAYFFSVAGCKLIQRIRVICFEKVINMEVGWFDEPNNSSGALSARLSAVAASVRALVGDALGLLVQNLACALAGLIIAFIACWQLALVILVLIPLIGANGYVQTKFMKGFSKDAKMMYEEASQVAKDAVGNIRMVASFCAQEKVMELYRTKCEDPMKTGIWQGLISGLGFGFSFFLLFSVYATIFYAGARLVDAGETSFPDVFRVFFALTMTSIGVSQFSSISPDSSKAKSATASIFGIIDKKSKIDPNDESGTTLDSVKGEIEFRHVSFKYPSRPKIQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGMQIGELQLKWFRQQMGLVSQEPVLFNDTIRDNIAYGKGGDATEAEITAAAQLANAHVFISGLQQGYDTVVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVSHRLSAIKNADLIAVMKDGVIVEKGSHETLVSVNDGFYASLVQLHTNASKIRVS 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr476g00004 1282 Pfam ABC transporter transmembrane region 712 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr476g00004 1282 Pfam ABC transporter transmembrane region 62 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr476g00004 1282 Pfam ABC transporter 1053 1202 IPR003439 GO:0005524
Mupr476g00004 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 617 IPR027417 -
Mupr476g00004 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 702 1017 - -
Mupr476g00004 1282 CDD ABC_MTABC3_MDL1_MDL2 1034 1272 - -
Mupr476g00004 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1024 1272 IPR027417 -
Mupr476g00004 1282 FunFam ABC transporter B family member 1 369 618 - -
Mupr476g00004 1282 Gene3D ABC transporter type 1, transmembrane domain 102 1008 IPR036640 GO:0005524|GO:0016020
Mupr476g00004 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 56 340 - -
Mupr476g00004 1282 SUPERFAMILY ABC transporter transmembrane region 37 363 IPR036640 GO:0005524|GO:0016020
Mupr476g00004 1282 MobiDBLite consensus disorder prediction 673 692 - -
Mupr476g00004 1282 PANTHER ABC TRANSPORTER B FAMILY 20 766 IPR039421 -
Mupr476g00004 1282 FunFam ABC transporter B family member 9 43 375 - -
Mupr476g00004 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 344 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr476g00004 1282 FunFam ABC transporter B family member 1 692 1000 - -
Mupr476g00004 1282 MobiDBLite consensus disorder prediction 21 35 - -
Mupr476g00004 1282 SMART AAA_5 1061 1255 IPR003593 GO:0016887
Mupr476g00004 1282 SMART AAA_5 406 598 IPR003593 GO:0016887
Mupr476g00004 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1034 1271 IPR003439 GO:0005524
Mupr476g00004 1282 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524|GO:0016887
Mupr476g00004 1282 FunFam ABC transporter B family member 1 1024 1274 - -
Mupr476g00004 1282 ProSitePatterns ABC transporters family signature. 1174 1188 IPR017871 GO:0005524|GO:0016887
Mupr476g00004 1282 Pfam ABC transporter 398 546 IPR003439 GO:0005524
Mupr476g00004 1282 Gene3D - 1024 1280 IPR027417 -
Mupr476g00004 1282 Gene3D - 377 643 IPR027417 -
Mupr476g00004 1282 CDD ABC_MTABC3_MDL1_MDL2 379 617 - -
Mupr476g00004 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 615 IPR003439 GO:0005524
Mupr476g00004 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 713 999 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr476g00004 1282 SUPERFAMILY ABC transporter transmembrane region 695 1018 IPR036640 GO:0005524|GO:0016020
Mupr476g00004 1282 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr476g00004 Mupr-Chr476 37252 47168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr476g00004 9 1273 Calmodulin-binding Proteins AT2G36910 42.958 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr476g00004 K05658 - gmx:100800034 1988