Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr476g00004 | TGTTGGAACACAGAAAGCACTGATCTTGACATGGATGGCAACGGGAACCCTGAAGAAAGCTTTGCAAACGGGGAAAAGAAAGAACAGAGCAAACAAAAGGAAAACGCCGAGACGGTTCCATTTCGCAAGCTGTTTGCGTTTGCTGACTCCGCCGACATTTTCTTGATGGTTGTTGGAAGCATTGGTGGCATTGGAAACGGTTTGGGGTTTCCTCTTATGACGTTACTATTTGGTCAAATAATTGACACCTTCGGTAGTAACCAGGAAAGCCCCAACCTAGTGGAAAAAGTATCGAGGGTTTCTCTTAAATTTGTATACTTGGCAATAGGATCTGGGATCGCAGCGTTCCTCCAGGTGACTTGCTGGATGGTCACAGGGGAAAGACAAGCTGCACGAATAAGGGGATTGTATTTGAAAACTATACTGAGACAAGATGTTGCTTTCTTCGACAAGGAAACAAACACTGGAGAGGTGATTGGGAGAATATCAGGTGACACGGTTCTCATTCAAGATGCTATGGGAGAGAAGGTTGGGAAATTTGTGCAGCTGATAGCAACATTCTTAGGGGGCTTTGCGATAGCATTTGCCAAAGGGTGGCTTCTAACCGTTGTCATATTGTCCATTCTTCCACTCCTAATTTTGTCAGGGGCTACTATGGCCATCATCCAAGGCAGGATGGCTTCCCGAGGTCAAGCTGCTTATGCAAAAGCTGCACGCCTAGTTGGACAGACAATTAGCTCAATAAGAACTGTTGCATCCTTTACTGGGGAAAAACAAGCAGTGTCTGATTATAGCAAATTTCTTGTAGAAGCTTACGTAACAGGCGTTCATGAAGGTTCCGTTGCTGGCATGGCCCTTGGCACAGTTATGCTTCTTGTTTTCTGTGGTTATGCTTTGGCTGTGTGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACGGTCCTTAATGTGATTGCTTCTTTGTTAACTGCTTCAGTGTCTCTTGGTGAGGCATCTCCTATCATAAGTGCTTTTGCAGCGGGTCAGGCTGCAGCATACAAAATGTTTGAAACAATTGAGAGGAAGCCAGAGATTGATGCTTATAATCCAAATGGGAAAATATTAGAGGATATTGAAGGTGAAATAGAGTTGAGGGATGTTTTTTTCAGTTATCCAGCGAGGCCTGAGGAGTTGATATTCGATGGGTTTTCTCTTGAGATTCCTAAAGGTACAAGTGCAGGATTAGTGGGACAAAGTGGGAGTGGAAAGTCTACGGTTATCAGTTTGCTAGAAAGGTTCTATGATCCACAAGCAGGTGAAGTTCTTATTGATGGCATTAACCTGAAAGAGTTTCAGCTTAGGTGGATCAGGGGGAAAATTGGCCTTGTTAACCAGGAGCCGGTGTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAGGATGAAGTGACAATTGAAGAGATAAGATCAGCATCTGAGCTTGCAAATGCTACTAAATTCATTGATAAACTGCCACAGGGATTCAACACAATGGTTGGTGAGCATGGAACTCAACTCTCTGGTGGACAGAAACAGCGCATTGCCATAGCAAGAGCAATCCTAAAAGATCCGAAAATTCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGGTCATGGTTAACCGAACTACTGTTGTTGTGGCACATCGTTTGAGCACAGTGAGGAATGCTGACATGATTGCTGTAATTCATAGAGGGAAGGTGGTTGAAAAAGGAACACACTCAGAATTACTCAAGGATTCTGACGGAGCTTACTCTCAATTGATACGTTTACAAGAAGTAAACAGTGAATCAGAAGAAACTACAAACCTTCACAACAAGAGTGTACTTTCCGCGGAATCCTCCGAACAGTTAACTGAAAAGAGGTCACTTTGGAGATCAATTAGTAGGGGATCATCTATAGGGAGTAGTAGCCGCCACTCATTTTCACTTTCCTTAGGTATACCCCAAGGAGTTAATCTCCCTGATCCTAAAGACGAAGACACATTACCCGAAGAAGAAGCACAAGAGGTTCCACTCCATCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTGTTATATTTCCCATATTTGGTGTGTTGATTTCCAGTGCCGTGAAAACATTTTATGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCACTAATGTTTGTGCTCCTTGGTCTTGCATCATTGTTGGTAATTCCAGCTCGAGCATATTTTTTTTCTGTGGCTGGATGCAAGTTAATCCAACGTATAAGGGTAATATGTTTTGAGAAAGTGATCAACATGGAGGTTGGTTGGTTTGATGAGCCCAACAACTCAAGTGGTGCCCTTAGTGCAAGGCTCTCAGCAGTTGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCACTGGGACTATTGGTCCAAAATTTAGCATGTGCCTTGGCAGGTCTGATTATTGCTTTCATTGCATGCTGGCAGCTGGCATTAGTTATTCTTGTCTTGATTCCCCTGATTGGAGCAAATGGCTATGTTCAAACGAAATTCATGAAGGGGTTCAGCAAAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAAGGATGCAGTTGGAAATATAAGAATGGTAGCTTCTTTCTGTGCTCAAGAAAAGGTCATGGAATTGTACAGGACGAAATGTGAAGACCCCATGAAAACAGGAATATGGCAAGGGTTGATCAGTGGATTAGGATTTGGGTTCTCATTTTTCTTACTATTTAGTGTCTATGCAACTATCTTCTATGCAGGAGCTAGACTTGTGGATGCGGGAGAGACATCGTTCCCAGATGTTTTTCGAGTTTTCTTTGCTTTAACTATGACATCTATTGGAGTTTCCCAATTTAGCTCAATTTCTCCTGATTCTAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATAATTGATAAGAAGTCAAAGATAGATCCAAATGATGAGTCTGGTACCACACTGGACAGTGTTAAGGGAGAAATCGAGTTTCGTCATGTGAGCTTCAAGTACCCATCTAGGCCAAAGATACAGATTTTCCGAGACCTTAGTTTGGCTATCCATTCTGGCAAAACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGCAAATCCACAGTGATTGCCTTGTTGCAGAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGACGGTATGCAAATTGGAGAGTTACAACTCAAGTGGTTTAGACAGCAAATGGGTCTTGTAAGCCAAGAGCCAGTGTTGTTCAATGACACTATTCGTGATAATATTGCTTATGGAAAGGGAGGTGATGCAACTGAAGCAGAAATCACAGCTGCAGCACAACTAGCTAATGCCCATGTGTTCATTAGTGGCTTACAACAGGGTTATGATACTGTCGTAGGAGAAAGGGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCCATTGCACGTGCTATAATTAAAAGTCCAAAGATATTACTGCTAGATGAAGCCACAAGTGCATTAGACGCTGAGTCAGAGAGAGTTGTTCAAGATGCATTGGATAAAGTCATGGTGAATAGGACTACTGTGGTTGTCTCACATCGTCTATCTGCAATTAAAAATGCAGATTTGATTGCTGTTATGAAGGATGGAGTTATAGTGGAGAAGGGAAGTCACGAAACACTCGTTAGTGTCAACGATGGATTTTATGCTTCCTTAGTCCAACTTCACACAAATGCTTCAAAAATAAGAGTTTCATAA | 3849 | 0.4284 | CWNTESTDLDMDGNGNPEESFANGEKKEQSKQKENAETVPFRKLFAFADSADIFLMVVGSIGGIGNGLGFPLMTLLFGQIIDTFGSNQESPNLVEKVSRVSLKFVYLAIGSGIAAFLQVTCWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGRISGDTVLIQDAMGEKVGKFVQLIATFLGGFAIAFAKGWLLTVVILSILPLLILSGATMAIIQGRMASRGQAAYAKAARLVGQTISSIRTVASFTGEKQAVSDYSKFLVEAYVTGVHEGSVAGMALGTVMLLVFCGYALAVWFGAKMIMEKGYNGGTVLNVIASLLTASVSLGEASPIISAFAAGQAAAYKMFETIERKPEIDAYNPNGKILEDIEGEIELRDVFFSYPARPEELIFDGFSLEIPKGTSAGLVGQSGSGKSTVISLLERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVNQEPVLFASSIKDNIAYGKDEVTIEEIRSASELANATKFIDKLPQGFNTMVGEHGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERIVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHRGKVVEKGTHSELLKDSDGAYSQLIRLQEVNSESEETTNLHNKSVLSAESSEQLTEKRSLWRSISRGSSIGSSSRHSFSLSLGIPQGVNLPDPKDEDTLPEEEAQEVPLHRLASLNKPEIPVLLIGCVAAIANGVIFPIFGVLISSAVKTFYEPFDEMKKDSKFWALMFVLLGLASLLVIPARAYFFSVAGCKLIQRIRVICFEKVINMEVGWFDEPNNSSGALSARLSAVAASVRALVGDALGLLVQNLACALAGLIIAFIACWQLALVILVLIPLIGANGYVQTKFMKGFSKDAKMMYEEASQVAKDAVGNIRMVASFCAQEKVMELYRTKCEDPMKTGIWQGLISGLGFGFSFFLLFSVYATIFYAGARLVDAGETSFPDVFRVFFALTMTSIGVSQFSSISPDSSKAKSATASIFGIIDKKSKIDPNDESGTTLDSVKGEIEFRHVSFKYPSRPKIQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGMQIGELQLKWFRQQMGLVSQEPVLFNDTIRDNIAYGKGGDATEAEITAAAQLANAHVFISGLQQGYDTVVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVSHRLSAIKNADLIAVMKDGVIVEKGSHETLVSVNDGFYASLVQLHTNASKIRVS | 1282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr476g00004 | 1282 | Pfam | ABC transporter transmembrane region | 712 | 984 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mupr476g00004 | 1282 | Pfam | ABC transporter transmembrane region | 62 | 329 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mupr476g00004 | 1282 | Pfam | ABC transporter | 1053 | 1202 | IPR003439 | GO:0005524 | |
Mupr476g00004 | 1282 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 368 | 617 | IPR027417 | - | |
Mupr476g00004 | 1282 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 702 | 1017 | - | - | |
Mupr476g00004 | 1282 | CDD | ABC_MTABC3_MDL1_MDL2 | 1034 | 1272 | - | - | |
Mupr476g00004 | 1282 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1024 | 1272 | IPR027417 | - | |
Mupr476g00004 | 1282 | FunFam | ABC transporter B family member 1 | 369 | 618 | - | - | |
Mupr476g00004 | 1282 | Gene3D | ABC transporter type 1, transmembrane domain | 102 | 1008 | IPR036640 | GO:0005524|GO:0016020 | |
Mupr476g00004 | 1282 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 56 | 340 | - | - | |
Mupr476g00004 | 1282 | SUPERFAMILY | ABC transporter transmembrane region | 37 | 363 | IPR036640 | GO:0005524|GO:0016020 | |
Mupr476g00004 | 1282 | MobiDBLite | consensus disorder prediction | 673 | 692 | - | - | |
Mupr476g00004 | 1282 | PANTHER | ABC TRANSPORTER B FAMILY | 20 | 766 | IPR039421 | - | |
Mupr476g00004 | 1282 | FunFam | ABC transporter B family member 9 | 43 | 375 | - | - | |
Mupr476g00004 | 1282 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 57 | 344 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mupr476g00004 | 1282 | FunFam | ABC transporter B family member 1 | 692 | 1000 | - | - | |
Mupr476g00004 | 1282 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
Mupr476g00004 | 1282 | SMART | AAA_5 | 1061 | 1255 | IPR003593 | GO:0016887 | |
Mupr476g00004 | 1282 | SMART | AAA_5 | 406 | 598 | IPR003593 | GO:0016887 | |
Mupr476g00004 | 1282 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1034 | 1271 | IPR003439 | GO:0005524 | |
Mupr476g00004 | 1282 | ProSitePatterns | ABC transporters family signature. | 518 | 532 | IPR017871 | GO:0005524|GO:0016887 | |
Mupr476g00004 | 1282 | FunFam | ABC transporter B family member 1 | 1024 | 1274 | - | - | |
Mupr476g00004 | 1282 | ProSitePatterns | ABC transporters family signature. | 1174 | 1188 | IPR017871 | GO:0005524|GO:0016887 | |
Mupr476g00004 | 1282 | Pfam | ABC transporter | 398 | 546 | IPR003439 | GO:0005524 | |
Mupr476g00004 | 1282 | Gene3D | - | 1024 | 1280 | IPR027417 | - | |
Mupr476g00004 | 1282 | Gene3D | - | 377 | 643 | IPR027417 | - | |
Mupr476g00004 | 1282 | CDD | ABC_MTABC3_MDL1_MDL2 | 379 | 617 | - | - | |
Mupr476g00004 | 1282 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 379 | 615 | IPR003439 | GO:0005524 | |
Mupr476g00004 | 1282 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 713 | 999 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mupr476g00004 | 1282 | SUPERFAMILY | ABC transporter transmembrane region | 695 | 1018 | IPR036640 | GO:0005524|GO:0016020 | |
Mupr476g00004 | 1282 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr476g00004 | Mupr-Chr476 | 37252 | 47168 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr476g00004 | 9 | 1273 | Calmodulin-binding Proteins | AT2G36910 | 42.958 | 0.0 | 1018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr476g00004 | K05658 | - | gmx:100800034 | 1988 |