Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr476g00001 AAGGATATGGCCGAGGCTGAGGAGAAATCAGAGCAGTGTTGTTTGGAGAATAAGCAAATTAATGCTACTTCTGGCTCTTCTGTGTCAGAAGGCAGTGGCAGTGCTATACCCAAGTCATCAAGCGAATGTAGCCCGGGATCGACATTGCCCTCTAATCGGAGGACCACTGGCCCTGTTAGGCGCACAAAGGATGGTTGGACAGTAGAGGAGGATGAGATATTAACTGATGCTGTTGCAGTTTTTAATGCCAAGAATTGGAAGAGCATAGCTAAGTTATTTCCGGCTAGATCAGAAGTTCAATGTCTGCATAGATGGCAAAAAGTTCTTAATCCAGAACTCATTAAAGGACCTTGGACTCAGGAGGAGGATGATAAAATAGTAGAAATGGTGTCTATACATGGACCTTCAAAATGGTCTTTGATAGCCACGTCTTTGCCTGGTCGAATAGGAAAACAGTGCCGAGAACGATGGCACAATCACCTTAATCCTGACATAAAGAAGGATGCCTGGACTTTGGAGGAGGAATTGGCCATTATGGATGCTCATCATATACACGGAAACAAATGGGCTGAAATAGCTAAGATTCTTCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGGTGGATTTCTATTTAGCTACTGGAACACTTCCGCCCATTCCGATTCCAAAGAACAGTGCACAAGCTTCTGTCAAAGATACAGTTAGACATTCTACAACTAACACAATACATGATTGTTCAAATAAAGGATTAGATGCCACCATTGTATCATCATCTATAAATACATACATCAGTAAGCTGGATAACAGTGATAAGAATCAACTAGAGTCCTCAGGAATAGTTAGAGAGGTTGGTGATTCTTCAAATGTTCCTGCAAATGAATCTGCTGAGTCTTACTTCATAGAATGCAATAGTTCATCCAACAATGGTCTCAGCTGTAGTAACTCAGAGCCGGTGAACGGATATAATTTTAGAATAATCAGTGAGCCAAAATTTGAGAATCCTGAACTCAATGGCAACCCAACAATTTATCATTGCATGAATAATGATGAAATGAACAGTGGCAAGTTAACCAGAAATTTATTTCCAAAGGAAAGTCCAATCGTTGGTTCTTTTTATTATGAGCCACCAAAGTTTGGTAACTCACTTCCTTTTAATATCTCTGGCCTGCAGAATGAGTTCTTTTCTTATCCAATGATGTCACCTGTTGGTTTCTTAACTCCACCTCCTGTGAAGGGAAGTGAATTATGGTCAGAATCTCCTGAATCAATATTGAAAAAAGCAGCTAAAACTTTTCCAACTCCTTCCATAGTGAGGAAGAGAAGCAATGGAGTCAAGAGACCTGCCACTCCTAGTAAGGGTGCAAAAGCAGTTAATGATTCACATGCTTATAATGAACAAGCAAGAACAAATGATATTTCTGGTTCTGAAGTTGTGAGGTTATCTCTGACTCTGAGTCCACCAAGCCATAGCTATGAGAGTAACATTGCCCATAGTAAGGCTATAAACACAACTCCTCCGTACCGATTAAGATCCAAGCAAACAGCAATTAAGTCTTTGGAGAAACAACTTGAATCTGCATTTGTCATAGAAAAGCGTCGA 1626 0.4022 KDMAEAEEKSEQCCLENKQINATSGSSVSEGSGSAIPKSSSECSPGSTLPSNRRTTGPVRRTKDGWTVEEDEILTDAVAVFNAKNWKSIAKLFPARSEVQCLHRWQKVLNPELIKGPWTQEEDDKIVEMVSIHGPSKWSLIATSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELAIMDAHHIHGNKWAEIAKILPGRTDNAIKNHWNSSLKKKVDFYLATGTLPPIPIPKNSAQASVKDTVRHSTTNTIHDCSNKGLDATIVSSSINTYISKLDNSDKNQLESSGIVREVGDSSNVPANESAESYFIECNSSSNNGLSCSNSEPVNGYNFRIISEPKFENPELNGNPTIYHCMNNDEMNSGKLTRNLFPKESPIVGSFYYEPPKFGNSLPFNISGLQNEFFSYPMMSPVGFLTPPPVKGSELWSESPESILKKAAKTFPTPSIVRKRSNGVKRPATPSKGAKAVNDSHAYNEQARTNDISGSEVVRLSLTLSPPSHSYESNIAHSKAINTTPPYRLRSKQTAIKSLEKQLESAFVIEKRR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr476g00001 542 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 165 IPR017930 -
Mupr476g00001 542 Gene3D - 168 247 - -
Mupr476g00001 542 ProSiteProfiles Myb-like domain profile. 58 109 IPR001005 -
Mupr476g00001 542 Gene3D - 115 166 - -
Mupr476g00001 542 FunFam Transcription factor MYB3R-2 168 237 - -
Mupr476g00001 542 SUPERFAMILY Homeodomain-like 65 119 IPR009057 -
Mupr476g00001 542 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Mupr476g00001 542 ProSiteProfiles Myb-like domain profile. 110 161 IPR001005 -
Mupr476g00001 542 SMART sant 62 111 IPR001005 -
Mupr476g00001 542 SMART sant 114 163 IPR001005 -
Mupr476g00001 542 SMART sant 166 214 IPR001005 -
Mupr476g00001 542 CDD SANT 117 161 IPR001005 -
Mupr476g00001 542 MobiDBLite consensus disorder prediction 15 56 - -
Mupr476g00001 542 FunFam Transcriptional activator Myb isoform A 62 114 - -
Mupr476g00001 542 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 109 IPR017930 -
Mupr476g00001 542 FunFam Transcriptional activator Myb isoform A 115 167 - -
Mupr476g00001 542 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Mupr476g00001 542 Pfam Myb-like DNA-binding domain 167 210 IPR001005 -
Mupr476g00001 542 Pfam Myb-like DNA-binding domain 115 161 IPR001005 -
Mupr476g00001 542 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 216 IPR017930 -
Mupr476g00001 542 Gene3D - 58 114 - -
Mupr476g00001 542 PANTHER MYB PROTEIN-RELATED 63 148 - -
Mupr476g00001 542 CDD SANT 66 109 IPR001005 -
Mupr476g00001 542 SUPERFAMILY Homeodomain-like 112 208 IPR009057 -
Mupr476g00001 542 MobiDBLite consensus disorder prediction 1 62 - -
Mupr476g00001 542 CDD SANT 169 212 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr476g00001 Mupr-Chr476 2849 7029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr476g00001 2 533 MYB Transcription Factor Family AT3G09370 44.262 4.63e-123 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr476g00001 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr476g00001 K09422 - gmx:100777236 688.723