Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4769g00001 ATGGCAATGCCAATGTTAATGTCCCAATCATCAACTCTGCTAAAGCCATGCCCACCCTTCCTCATCCAATCCCTAAACCGCCACCCACCAAAACCCGTTACCCTCCGAATCCACAGCGCGGCCCAAGCCCACACCATCCAATTCCTGAAACCCTACCTTGCGGCCCAGCACAGGCCCATCCTCTGCGGCTGGCTCTGCAGCGCGGTCTCCGTCTACTCCCTCTCCAAGCTCCTCTCCAGATTCTCCAAAATCGCCACCGTCAACGCCGTCGACGCCCTCCCCCTCGCCGCGCTACTCGCCGCGCGCTTCGTCGCCAGCTACGCGCAGCGCGCACTCCTCTGGGAAGCCTCGCTCAACGCCGTTTACGAGCTCCGGCTACACGTCTTCGACCGCACTCTCCAAAGGGAACTGGCGTACTTCGAAGGAAACCTTGGCGCGTCCGCCGGAGACATTGCGTACCGAATCACAGCCGAAGCTTCCGACCTTGCCACTACCTTCTACACTCTTCTCAACGTCGACCATAGTACCCAGTACTCTGCAGTTGTCGGCAATGATGATGCAGATGTTAGCTATAAGTCCTACCCTTTCTTTGATTTCAGCCATGGTGAGTCACAGTCAGGGGCTTATGCTTGTTTCATTCTGGTTCAGGGTAAATTTGATTATGAATCTTGTATTATTCCTTGCATGGTGCTAGCTGTTACCTTTCTTGGTCAAGAACTTCGTAAGATATCCAAAGAGGCACATGTCAGCATTGCTGCTCTCTCAGCTTATCTAAATGAGGTGCTTCCTGCAATTCTCTTTGTGAAAGCAAACAATGCAGAGTCGTGTGAGAATACCAGGTTTAAGAGACTGGCTCTGATGGACTATTCTGCAAAGCTGAAGAAGAAAAAGATGAAAGCATTGATTCCTCAGATTATACATGCTATTTATTTTGGAGTCCTTTCCATACTTTGCGCTAGTTCACTAGTGATTTCAAGAGGTTCATTTGATCGCTATAGCTTGGCATCATTCATGACATCGTTGCTTTTCTTGATTGAGCCAATCCAGGATGTAGGAAAAGCTTACAATGAATGGAAGCAGGGAGAACCAGCTGCTGAACGCTTGCTTGCCATGACCAGGTTCAAAAATAAGGTGGTTGAGAAACCAGATGCTGTTGATTTGGACCGTGTAACTGGCAACCTGAATTTCTGTGATGTCTCCTTTGGGTATAATGATGACATGCCACTTGTTTTGAACGGATTGAATCTTCACATTAAAACTGGAGAGATAGTTGCTATTGTGGGTCCTTCTGGTGGAGGGAAAACAACGCTTGTAAAACTGTTGCTTCGGCTTTATGATCCTATATCTGGTTGTATAATGATTGATGATCATAACATCCAAAACATTCGGTTGACAAGTTTGAGAAGACATGTTAGTGTTGTTTCTCAAGATATAGTAAGTACAGTTGCTGAAAACATTGGTTATAGGGATCTGATAACAGAAATTGACATGGAGAAGGTGAAGCATGCAGCTCAAACTGCTCATGCAGATGAGTTTATTAATAAACTTCCAGAAGGATACCAAACCAATATTGGACCAAGGGGCTCAACTTTAAGTGGGGGCCAGAGGCAAAGGCTGGCTATTGCGAGGGCTTTCTATCAAAATTCTTCTATATTAATTCTGGATGAGGCAACTTCGTCCTTGGATAGTAAATCTGAGTTATTAGTGAGACAAGCTGTTGAGCATTTGATGCAAAATCGCACAGTGCTTGTGATTTCCCATCGCTTGGAAACAGTTATGATGGCTAAACGAGTATTTCTTTTGGATAATGGGAAGCTAAAAGAGTTATCTCGATCAACTATGTTGGACGGTCATAAGAATTCATTGCTATCATCTGAAATTTTTTACTATTGA 1893 0.4559 MAMPMLMSQSSTLLKPCPPFLIQSLNRHPPKPVTLRIHSAAQAHTIQFLKPYLAAQHRPILCGWLCSAVSVYSLSKLLSRFSKIATVNAVDALPLAALLAARFVASYAQRALLWEASLNAVYELRLHVFDRTLQRELAYFEGNLGASAGDIAYRITAEASDLATTFYTLLNVDHSTQYSAVVGNDDADVSYKSYPFFDFSHGESQSGAYACFILVQGKFDYESCIIPCMVLAVTFLGQELRKISKEAHVSIAALSAYLNEVLPAILFVKANNAESCENTRFKRLALMDYSAKLKKKKMKALIPQIIHAIYFGVLSILCASSLVISRGSFDRYSLASFMTSLLFLIEPIQDVGKAYNEWKQGEPAAERLLAMTRFKNKVVEKPDAVDLDRVTGNLNFCDVSFGYNDDMPLVLNGLNLHIKTGEIVAIVGPSGGGKTTLVKLLLRLYDPISGCIMIDDHNIQNIRLTSLRRHVSVVSQDIVSTVAENIGYRDLITEIDMEKVKHAAQTAHADEFINKLPEGYQTNIGPRGSTLSGGQRQRLAIARAFYQNSSILILDEATSSLDSKSELLVRQAVEHLMQNRTVLVISHRLETVMMAKRVFLLDNGKLKELSRSTMLDGHKNSLLSSEIFYY 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4769g00001 630 Gene3D ABC transporter type 1, transmembrane domain 45 176 IPR036640 GO:0005524|GO:0016020
Mupr4769g00001 630 CDD ABC_6TM_exporters 102 368 - -
Mupr4769g00001 630 SMART AAA_5 420 605 IPR003593 GO:0016887
Mupr4769g00001 630 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 91 609 IPR039421 -
Mupr4769g00001 630 SUPERFAMILY ABC transporter transmembrane region 49 170 IPR036640 GO:0005524|GO:0016020
Mupr4769g00001 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 612 IPR027417 -
Mupr4769g00001 630 Pfam ABC transporter transmembrane region 224 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4769g00001 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 628 IPR003439 GO:0005524
Mupr4769g00001 630 ProSitePatterns ABC transporters family signature. 531 545 IPR017871 GO:0005524|GO:0016887
Mupr4769g00001 630 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 65 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4769g00001 630 Pfam ABC transporter 411 559 IPR003439 GO:0005524
Mupr4769g00001 630 Gene3D ABC transporter type 1, transmembrane domain 223 391 IPR036640 GO:0005524|GO:0016020
Mupr4769g00001 630 Gene3D - 392 612 IPR027417 -
Mupr4769g00001 630 SUPERFAMILY ABC transporter transmembrane region 224 372 IPR036640 GO:0005524|GO:0016020
Mupr4769g00001 630 FunFam ABC transporter ATP-binding protein 387 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4769g00001 Mupr-Chr4769 2942 9676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4769g00001 380 627 Calmodulin-binding Proteins AT2G36910 38.039 8.22e-48 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4769g00001 K02021 - gmx:100788075 858.596