Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4766g00006 GAAACCCTAATTCCATTTAGGAATAAAAGCGAGACAAACGGCGCCTCCAGTCTCCAGTTGAAGCCGAAGCCTTTGATCGCATTGCAATTAACCATGATTTTCCGATTCAGTGTTGTGTTTGGGAATGCAAGAGGCAATTTTGATAGGATTTTTGTTGCGCAGTCGAGGAGAAAGGTTAGAGAGCCAAAGGAAGAAAACGTTACTCTGGGTCCAGCTGTCAGAGACGGCGAGCATGTGTTTGGAGTCGCTCGTATCTTTGCTTCCTTCAATGATACCTTCATTCATGTCACCGATCTGTCTGGGAGGGAAACACTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAATCATCTCCATATGCTGCTATGCTTGCAGCACAGGATGTTGCTGTCAGATGCAAGGAGTTGGGCATAACTGCCCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACAAAAACACCTGGTCCTGGTGCTCAATCAGCTCTTCGGGCTCTTGCTCGTTCTGGAATGAAAATTGGTCGTATAGAGGATGTGACTCCCATTCCTTCGGATAGCACCCGTAGAAAGAGTGGTAGAAGGGGTAGACAGATTGTTGAAAGTTTGCATGTTTGCTTCGTGGCTTGGAAAGTTGCTAATCAAGGTACT 663 0.4661 ETLIPFRNKSETNGASSLQLKPKPLIALQLTMIFRFSVVFGNARGNFDRIFVAQSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAVRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRQIVESLHVCFVAWKVANQGT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4766g00006 221 FunFam 40S ribosomal protein S14 53 203 - -
Mupr4766g00006 221 SUPERFAMILY Translational machinery components 76 200 - -
Mupr4766g00006 221 Pfam Ribosomal protein S11 81 199 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00006 221 ProSitePatterns Ribosomal protein S11 signature. 168 190 IPR018102 -
Mupr4766g00006 221 Hamap 30S ribosomal protein S11 [rpsK]. 49 200 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00006 221 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 56 196 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00006 221 Gene3D Ribosomal protein S11 54 203 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4766g00006 Mupr-Chr4766 43898 45964 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4766g00006 55 192 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.580 2.57e-90 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4766g00006 K02955 - gmx:100785807 283.493