Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4766g00005 CGAGACAAAGGGCGCCTCCACTTTCCAGAGTCGAAGCCTTTCATCGCATTGCAAGTAACCATGATTTTCCGATTCAGTGTTGTGTTTGGGAATGCAAGAGGCAATTCTGATAGGATTTATGTTCTGCAGTCGAGGAGAAAGGTTAGAGAGCCAAAGGAAGAAAACGTTACTCTGGGTCCAGCTGTCAGAGACGGCGAGCATGTGTTCGGAGTCGCTCGTATCTTTGCTTCCTTCAATGATACCTTCATTCATGTCACCGATCTGTCTGGGAGGGAAACACTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGATAGAGATGAATCATCTCCATATGCTGCTATGCTTGCAGCACAGGATGTTGCTGTCAGATGCAAGGAGTTGGGCATAACTGCCCTTCATATCAAGCTCCGTGCCACTGGAGGAAACAAGACCAAAACACCTGGTCCTGGTGCTCAATCAGCTCTTCGGGCTCTTGCTCGTTCCGGAATGAAAATTGGTCGTATAGAGGATGTGACTCCCATTCCTTCAGATAGCACTCGTAGAAAGAGTGGTAGAAGGGGCAGAAGGCTTTAA 579 0.4801 RDKGRLHFPESKPFIALQVTMIFRFSVVFGNARGNSDRIYVLQSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAVRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4766g00005 192 Pfam Ribosomal protein S11 70 188 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00005 192 MobiDBLite consensus disorder prediction 172 192 - -
Mupr4766g00005 192 Gene3D Ribosomal protein S11 43 192 IPR036967 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00005 192 FunFam 40S ribosomal protein S14 43 192 - -
Mupr4766g00005 192 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 45 185 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00005 192 Hamap 30S ribosomal protein S11 [rpsK]. 38 189 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr4766g00005 192 ProSitePatterns Ribosomal protein S11 signature. 157 179 IPR018102 -
Mupr4766g00005 192 SUPERFAMILY Translational machinery components 65 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4766g00005 Mupr-Chr4766 38274 40451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4766g00005 44 181 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.580 1.77e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4766g00005 K02955 - gmx:100780604 264.618