Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4762g00005 ATGTTGAATGTTGACGTGATTGGGAACAAAAAAAGGAAGAGGTGTGGGAGGGTTTTTAGGTTCAAGAACTTTGGTGAACCTGGATACCCTGTTATGTTCACCGGGCCGTTTCGCGAGAACGTGAATGCATTACTTGAATTTGCAAATTTGGAGAGTAATTTAAGTGTTGGAATGCCAATGTGGTCTTTTCAACTCCAAGTTCATCACCACCCACCTTTGCATATCTTCTTGTTTGTCATTGAAGAGCCAATTGAGGCTGCACTCAATCGTCACTGCAACCATTGTCAATACGTTGGCTGGGGCAAGCATTTGATTTGCAATAAGAAGTATCACTTCGTGTTACCCTCAAAGGAGGCACTGGCTACCTGCACGAGCTGTGAAGGGTGCTGTGATGCAATTGCTACAATTAACAATGGTAAGTCCAAATTAATTGAATTACAGGGTCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGACATTTGCTATGTGTCAATGGATTGGAAATGGGTTCCAATTTGCCTGGGAATCAGATCATGGACTTTTGGAACCGTTTGTGCAACGGATTGCAAGCAAGGAAAGTGAGTTTGAATGACATTTCACAAAAAAGAGGAATGGAACTGAGACTTGTGAATGGAATAGCATACAATGAGCCATGGTTTGGTCGTTGGGGTTACAAATTTGGTCGAGGATGTTTTGGTGTAACTCATTCCATGTACCACAAAGCCACAGAGGCAATAAGAAGCATGCCACTATACTTGATCATACACCACATTAACAATTCCAACCATGACATTCCCCTCATCTTCTCAAGGTACCAAACCCTTTCAGACCAATCCTTGGTGACCCTTGGTGACCTATTCCATTACATGTTAGACCTCAAATCACGTCTTCCTCGTGAAACTTGCATTGGTTCTTACAACACAAGTGCATTGGTTGAAACCAATTGTCGTTGGTCCCCTAAAAGGATTGAGATGGCAACAAGGGTCATTGTTGAGGCCTTGAAAAGAACAGAGTTTAGATGGGTTTCAAGGCAAGAAGTTAGAGACACTGCACGTGCATACATTGGTGACACGGGTTTGCTAGATTTTGTGTTGAAGTCACTAGGAAACCATGTTGTGGGAAACTATTTGGTTCGTCGAAGCTTGAACCCCGTGACAAAAGTCTTGGAATATTGCTTAGAAGACATTGCTAATGTGTACCCTTGTAATGAAGGGTTGGTCATGAGTAACAAAGTGAAGGATAAGTACAAGATCACAAGGGCTCAACTAATGAAGGACATGCTTTATTTGTACAAGAATATTCTTACAGATCCAAAACCAATTATAGGGTCGGAATTTCTCTCGGCTATATCATTGGCAGCTAGGATAATTCTTGACACCAAGTATTTTGTAAAAGATTACTTTGGAGATGTTCCTTACCAAGTTGAATTAGGCTCAGAAGGAAAACTCAACCTTTATTGTACAATTTTGTTGGGGAACAATGTTGGCACTGATGAGTACTTAAACAAAGGGATTATGCCACCCCATGAATGTATCACATTGAAAAGCAACGCTACTATCGATGACTTGAAGCTAGAAGTTGAAAGGAATTTCAGAGAAATTTATTGGGGGTTAAGGAGTTTTGTGGTGGAATCAATTAGGAATTTTAATGCCAATGATGGGACACAAATGGTTTTTGGGCTAATTGAAGTGGGTGGAAAAATTGTGCTTGAGGGTTGGCATCGTGACATAGGAACGAACATGATTGAGCAAATATGTGAAAGTGATCCAAACAATGGTATAGTGGATTGTGCTTGTGGAACTATAGACGATGATGGTGAAAGGATGGTCTCGTGTGATATTTGTGAAATTTCGCAGCACACTAGATGTGTTCGAATTCCAAATGATGAAGAAATTCCTCATATTTTTTTGTGCAAAAAGTGCGAGCAAGAAATTGTTTTGTTCCCTTCGTTGCCATAG 1965 0.4061 MLNVDVIGNKKRKRCGRVFRFKNFGEPGYPVMFTGPFRENVNALLEFANLESNLSVGMPMWSFQLQVHHHPPLHIFLFVIEEPIEAALNRHCNHCQYVGWGKHLICNKKYHFVLPSKEALATCTSCEGCCDAIATINNGKSKLIELQGHMMHGVFHSNGFGHLLCVNGLEMGSNLPGNQIMDFWNRLCNGLQARKVSLNDISQKRGMELRLVNGIAYNEPWFGRWGYKFGRGCFGVTHSMYHKATEAIRSMPLYLIIHHINNSNHDIPLIFSRYQTLSDQSLVTLGDLFHYMLDLKSRLPRETCIGSYNTSALVETNCRWSPKRIEMATRVIVEALKRTEFRWVSRQEVRDTARAYIGDTGLLDFVLKSLGNHVVGNYLVRRSLNPVTKVLEYCLEDIANVYPCNEGLVMSNKVKDKYKITRAQLMKDMLYLYKNILTDPKPIIGSEFLSAISLAARIILDTKYFVKDYFGDVPYQVELGSEGKLNLYCTILLGNNVGTDEYLNKGIMPPHECITLKSNATIDDLKLEVERNFREIYWGLRSFVVESIRNFNANDGTQMVFGLIEVGGKIVLEGWHRDIGTNMIEQICESDPNNGIVDCACGTIDDDGERMVSCDICEISQHTRCVRIPNDEEIPHIFLCKKCEQEIVLFPSLP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4762g00005 654 CDD PHD_MMD1_like 598 643 - -
Mupr4762g00005 654 SUPERFAMILY FYVE/PHD zinc finger 590 646 IPR011011 -
Mupr4762g00005 654 ProSitePatterns Zinc finger PHD-type signature. 599 643 IPR019786 -
Mupr4762g00005 654 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 584 647 IPR013083 -
Mupr4762g00005 654 Pfam PHD-finger 599 645 IPR019787 -
Mupr4762g00005 654 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 647 - -
Mupr4762g00005 654 SMART PHD_3 598 644 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4762g00005 Mupr-Chr4762 54508 58959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4762g00005 10 654 PHD Transcription Factor Family AT5G22260 50.515 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr4762g00005 PHD 7.7e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4762g00005 K26271 - gmx:100780210 1215.29