Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4758g00003 TCTCCTGTTCAAATGTCAAATATTTCAGGTGATGAAGGAAGTTTCTCCTCAGGAAACAATGGGGAAGAAGTTCATCAAGAAAGCCAGCAGCAACAGCTACAAAACCAACTTCATGACTCAATTTCAGGACCAGCCACTGCTTGCAATAGCAATGCCTCCACTAATCAACAACAAGCCAACAAGAAGAAACGAAACCTTCCTGGAACCCCAGGCAAATATTCAACTACCCCAACTTCAATTTTTGTTTCTGCCCATCCTAATGCTGAAGTTATTGCTTTATCACCAACCACACTAATGGCAACAAATAGATTCGTGTGTGAGATCTGCAACAAAGGGTTTCAGAGGGACCAAAACCTTCAGTTGCACCGCAGAGGTCACAATCTTCCATGGAAACTGAGGCAAAGATCAAGCAGTGAGGTGAAGAAACGGGTCTATGTGTGCCCTGAGCCATCATGCGTCCACCATAACCCAGCTCGTGCATTAGGAGACCTCACTGGCATCAAAAAGCATTATAGCCGCAAACACGGTGAGAAGAAATGGAAATGTGACAAGTGCTCTAAAAGATACGCAGTCCAATCTGATTGGAAGGCCCACCAGAAAACTTGTGGCACTCGGGAATACAAATGTGATTGTGGAACCATATTTTCCAGGAGAGATAGTTTTATCACCCACAGAGCTTTCTGCGATGCATTAACTGAAGAAAACAACCGAGTGAACCAGGGATTAACAAGTGGCATGCCAGCAAAATTGCAGAGTCAGATACCGGATCTTATGTCTACCATGCCTCTAAACACTAGTCCCAACACAGGATCCAAATTGGGGGACTATGACCCCAAGAATCCACTAAAATCACTCCCCCAAGTCCTTGTCCCAATACCATTCAACTCCATGAGCATGGGTGGGGGCATGTTCTCTACCAACGCAGGTGCACTTTTTGGTGGCCCCAAAACCATGTCCCCCTCTTCTTCCAGCCTCCAGCTAGGCTCCAACACCTCATCAAGCTTCAATTACTTGCAAGACAACAAAAATGGAGCACTAATTGCTGCCTCAGCTCAGATGTCTGCAACAGCATTACTGCAGAAAGCAGCCCAAATGGGTGCCACTGCAAGCAACAGCAGCATTAACTCCCCCATGATGCAAAAAGGCTTTGTTAGTGGCCCTGATCATGTTTCTTCAACTACTAGACCACCATATTCCGGTTCTATGCTGCAGCATAACCCCTCATACGACCACTTCCCTCCACAGCCTGATCTGTCTCACATGGCTGGGGTGAGTGGTGGAGGAGTATTCATCAATCAATTGTTTCATAAAGGACAAGAGATGTCACAAGTTTTTGACACTAATACTACTACTGCCGGGTCTACAATCAATGATGTGGGAATGTTCGGGCAAATGCCAATGGGAAGTGACCACAACCCGGGATTGATGAAGAATGATGTGGAACAAGAAGTTACTAATAGTAGTTTGATCCATGGAAGAGATGTAGCAGAAGGTAACTCAATGCAGCCATCAAGGTTTGGAGGGAGCAGTGACATGACAAGGGTTCATGATTTCTTGGGCATTGGTGGTTCAACTTCAAGAGTAGCAAGTTTGCACGAACCGCAGCAACATTTGGAAGCGTTAAGCCACCAGAGGTCCCAAGTTATGAATCATTTTCATCACCATTTTCCGCACGAGGATTCGACCATCGAGGAACCCATGTGGGATGTTTGA 1713 0.4583 SPVQMSNISGDEGSFSSGNNGEEVHQESQQQQLQNQLHDSISGPATACNSNASTNQQQANKKKRNLPGTPGKYSTTPTSIFVSAHPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSSEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRVNQGLTSGMPAKLQSQIPDLMSTMPLNTSPNTGSKLGDYDPKNPLKSLPQVLVPIPFNSMSMGGGMFSTNAGALFGGPKTMSPSSSSLQLGSNTSSSFNYLQDNKNGALIAASAQMSATALLQKAAQMGATASNSSINSPMMQKGFVSGPDHVSSTTRPPYSGSMLQHNPSYDHFPPQPDLSHMAGVSGGGVFINQLFHKGQEMSQVFDTNTTTAGSTINDVGMFGQMPMGSDHNPGLMKNDVEQEVTNSSLIHGRDVAEGNSMQPSRFGGSSDMTRVHDFLGIGGSTSRVASLHEPQQHLEALSHQRSQVMNHFHHHFPHEDSTIEEPMWDV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4758g00003 570 MobiDBLite consensus disorder prediction 1 74 - -
Mupr4758g00003 570 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 34 537 IPR031140 -
Mupr4758g00003 570 FunFam protein indeterminate-domain 5, chloroplastic-like 158 237 - -
Mupr4758g00003 570 FunFam protein indeterminate-domain 12-like 83 151 - -
Mupr4758g00003 570 SUPERFAMILY beta-beta-alpha zinc fingers 103 201 IPR036236 -
Mupr4758g00003 570 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Mupr4758g00003 570 MobiDBLite consensus disorder prediction 491 511 - -
Mupr4758g00003 570 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 126 IPR013087 -
Mupr4758g00003 570 Gene3D Classic Zinc Finger 159 238 - -
Mupr4758g00003 570 Gene3D Classic Zinc Finger 83 150 - -
Mupr4758g00003 570 SMART c2h2final6 104 126 IPR013087 -
Mupr4758g00003 570 SMART c2h2final6 145 175 IPR013087 -
Mupr4758g00003 570 SMART c2h2final6 180 200 IPR013087 -
Mupr4758g00003 570 Pfam Zinc finger, C2H2 type 104 126 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4758g00003 Mupr-Chr4758 16398 19150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4758g00003 61 374 IDZ Gene Family AT3G50700 52.754 3.67e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4758g00003 zf-C2H2 0.0059 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4758g00003 - - gmx:100779705 889.026