Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4754g00007 ATGTCGAACTTGCAGTTACAGCTTCACTCACCACCATCACTCTTATCGTCTTCATCGCTATCTTCTTCTTCATCATCTTCTTCTTACCTTAAGCTATTCCCAAACCAATCTTTCTCTTCAAAGTCCCTTCCTTTCAGGAATCCTAAACCCTTCACTCTCAGATGCCGTCACTCTGACCTCTTCGACCAGAATGCCTTAGCCTCCACACAGCGACCCACAAGACCCACTGCTTCAGTTGGAGCTTTGCCACCTAGGGTTTATGTTGGTTACTCCATTTACAAAGGGAAGGCTGCGCTTACTTTGACTCCTAGGCCCCCGGAATTCGCGCCGCTCGATTCAGGGGCATACAAAGTATCTAAGGAAGGTTATGTGCTGCTTCAGTTTGCACCTGCGGTTGGTATGCGCCAATATGATTGGAATAGGAAGCAGGTGTTTTCTTTATCGGTGGGTGAAATGGGAAGTGTGATTAGCCTTGGTGCAAGGGAGTCTTGTGAATTTTTTCATGATCCATTGAAGGGTAAAAGTGATGAAGGTAAAGTCAGGAAAGTCTTGAAGTTGGAGCCTCTACCAGATGGTTCTGGACACTTCTTTAACCTCAGTGTTCAAAACAAGCTTGTGAACGTGGATGAAAACATCTTTATCCCCATCACAAAAGCAGAGTTAGCAGTTTTGAGCTCAACTTTCAATTTTATCATGCCATACCTTCTAGGTTGGCATACCTTTGCAAACTCTATAAAGCCAGATGATTATAGTGGAACGAATAATGCCAACCCAAGATATGGAGGAGACTATGAATGGAACAGATAG 807 0.4424 MSNLQLQLHSPPSLLSSSSLSSSSSSSSYLKLFPNQSFSSKSLPFRNPKPFTLRCRHSDLFDQNALASTQRPTRPTASVGALPPRVYVGYSIYKGKAALTLTPRPPEFAPLDSGAYKVSKEGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGSVISLGARESCEFFHDPLKGKSDEGKVRKVLKLEPLPDGSGHFFNLSVQNKLVNVDENIFIPITKAELAVLSSTFNFIMPYLLGWHTFANSIKPDDYSGTNNANPRYGGDYEWNR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4754g00007 268 Gene3D Transcriptional Coactivator Pc4; Chain A 76 250 IPR009044 GO:0003677|GO:0006355
Mupr4754g00007 268 Pfam Whirly transcription factor 92 226 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mupr4754g00007 268 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 29 268 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mupr4754g00007 268 MobiDBLite consensus disorder prediction 1 20 - -
Mupr4754g00007 268 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 77 251 - -
Mupr4754g00007 268 SUPERFAMILY ssDNA-binding transcriptional regulator domain 84 268 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4754g00007 Mupr-Chr4754 31831 34700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4754g00007 46 268 Whirly Transcription Factor Family AT1G14410 67.265 9.10e-115 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mupr4754g00007 Whirly 6.6e-60 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4754g00007 K26559 - gmx:100789252 437.958