Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4754g00006 ATGATTTCCTACCAAGTTCACGTGTTCCGCTCTCCATTTCGCGTTCTGAAATATCCATACACAAACCCACCCAACACGCGTCTCTTGCTTGTGCTTCATGCCAACACAAAAGCTACCTTCCTTTGTTCATCACTCAGTGGCGACTCCTTTTCCACCCCAAAACAAAACCAGGCACATACTCTTTTTTTGGGTTACAATCCTCCAGAGGAACTGTTTGGGCTGGAGGTGGAACTCAAGCCTAGTAAGGGTAATTCTCATACACCAGAACCAAGGTCCTGGTTTGGTCCAAATGGACAGTATATCAGAGAGCTACCTTGTCCAAGTTGCCGGGGAAGGGGTTATACTCCTTGTACAGAGTGTGGAATAGAAAGATCAAGGCCAGACTGTCCAAAATGTTATGGAAAGGGTATACTGACTTGCCACCAGTGCTCTGGAGATCGTGTTATATGGGAAGAATCAATTGATGAACAACCATGGGAGAGAGCCCGTTCTATTTCCCCACTTAAAGTGAAGGAAGATGACGAAGTTGATAAATTAGACATAAAGCTAAATGTGAAGAAAAAATCCAAGCGTGTTTACCAGTCACCACCTCCAGAAGTTGGATTAAAGATTAGTCGTTCATTAAAAAGTCTCAATGCCAAAACTGGTCTGTTTAGCAACCGAATGAAGATTATCCACCAGGATCCCAAGCTTCAGGCACAGCGTGTGGCTGCTATTAAGAAAGCCAAGGGAACTGTTGCAGCAAGAAAGCACACTTCCAAAACTATGAAAGCTTTCTTTAGTGATCCAATTAACCGCCAGAAAAGGAGCATGGCCATGAAGGGAGTGAAATTCTACTGCCAAAACTGTGGGCGTGAAGGGCATAGGAGACACTACTGTCCAGAACTCAAGGATAGCTTGATTGACCGGCGATTCACGTGCAGGGTGTGTGGGGAAAAGGGACACAACAGAAGAACATGTAGGAAGTTAAGGATAAGCCATAGCAATGGGAGAATGATAAAACACCATCGGTGTAAAGTGTGTCGCCGATTCGGCCATAATCGCAGGACCTGCCCTCAAGCTGTTCCAAGCAAAAGAAGGAACACAGCCTCTCGAAGAGCATACAGGTGTAGGTTGTGCAAGAAAGAGGGACATAATATTAGGACATGTCCTAGTAGGACTGTTGTTACTGAGCATCCTCAA 1182 0.4518 MISYQVHVFRSPFRVLKYPYTNPPNTRLLLVLHANTKATFLCSSLSGDSFSTPKQNQAHTLFLGYNPPEELFGLEVELKPSKGNSHTPEPRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRPDCPKCYGKGILTCHQCSGDRVIWEESIDEQPWERARSISPLKVKEDDEVDKLDIKLNVKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSNRMKIIHQDPKLQAQRVAAIKKAKGTVAARKHTSKTMKAFFSDPINRQKRSMAMKGVKFYCQNCGREGHRRHYCPELKDSLIDRRFTCRVCGEKGHNRRTCRKLRISHSNGRMIKHHRCKVCRRFGHNRRTCPQAVPSKRRNTASRRAYRCRLCKKEGHNIRTCPSRTVVTEHPQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4754g00006 394 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 70 321 - -
Mupr4754g00006 394 Gene3D - 275 323 - -
Mupr4754g00006 394 Gene3D - 333 390 - -
Mupr4754g00006 394 ProSiteProfiles Zinc finger CCHC-type profile. 280 295 IPR001878 GO:0003676|GO:0008270
Mupr4754g00006 394 Pfam Zinc knuckle 368 384 IPR025829 -
Mupr4754g00006 394 ProSiteProfiles Zinc finger CCHC-type profile. 307 322 IPR001878 GO:0003676|GO:0008270
Mupr4754g00006 394 SUPERFAMILY Retrovirus zinc finger-like domains 277 323 IPR036875 GO:0003676|GO:0008270
Mupr4754g00006 394 SMART c2hcfinal6 306 322 IPR001878 GO:0003676|GO:0008270
Mupr4754g00006 394 SMART c2hcfinal6 337 353 IPR001878 GO:0003676|GO:0008270
Mupr4754g00006 394 SMART c2hcfinal6 369 385 IPR001878 GO:0003676|GO:0008270
Mupr4754g00006 394 SMART c2hcfinal6 279 295 IPR001878 GO:0003676|GO:0008270
Mupr4754g00006 394 SUPERFAMILY Retrovirus zinc finger-like domains 330 387 IPR036875 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4754g00006 13 388 C2H2 Transcription Factor Family AT5G20220 58.838 7.55e-158 449