LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4751g00001	ATGGACAAAGGATGGGGACTCACCCTTGATACCTCTTCCTCTCAATCCCTCCCATTGTTCCCTTCCAAACAGCCATCTGCCACCTCTTTCTCCAACGACAGGATGTTCCCTCTCCTCGGATTCCCCGTCAACCTTAGCCGCGCCGCCAACAAGGAAGACGACGACCACCGCAAAGTCGTCGGTGAAGTCGACTTCTTCTCCGATAGAAACAAACCAACACCAACACCCTCCCTCCACCAAAACGTTAAACCCAACATCATCAAAAAGGAAATTGATGAAACACCTCTTCACGTTAATACTGGTTTACAACTCCTTACCGCTAACACCGGAAGTGACCAATCTACCGTGGATGATGGAGTTTCATCGGATGCCGAAGATAAGCGAGCAGCCAAGACCACTGAGCTTGTACAGTTGCAAGTGGAGCTTCAACGCATGAACGCGGAGAACAAGAAGCTGAAAGAGATGCTTAGCCATGTGACCGGTAACTACACGGCCTTGCAGATGCATTTTATGACATTAATGCAACAGAACCAGCGCACAGAAAATGAGGTTGTTGAGGGAAAGGTCGAGGATAAAAACCATGGTGTTGGTGGAGGAAAGGTAGCGAGACAGTTCCTTGAGATAGGTCCAAGTGGCACAGGCGAAGTAGATGAACAAGTATCCGATTCTTCTTCAGATGAAAGAACACGATCGAGCACACCTCAGAACAATAATAACATTGAAGGTGGAACAAGAGATGGCGCGAGAAATAATAATGGTAAACACGAGTTGGGTAGGGAAGAGAGTCCAGAATCAGAATCACAAGGTGGTTGGGCTTCCAATAAGATTCAGAAAGTGAACCCTTCCAATGCCATGGATCAATCCACTACAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCCCGATCAGAAGCTCCCATGATCAGTGATGGATGCCAATGGAGAAAATATGGACAAAAAATGGCCAAGGGAAACCCATGTCCTCGAGCATATTACAGATGTACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGATAAAACAATTTTGGTGACAACATATGAAGGCACACACAACCATCCACTGCCACCTGCTGCTATGGCCATGGCATCAACCACTGCAGCTGCTGCAAGCATGTTGCTGTCAGGGTCAATGTCCAGTGCCGATGGAATAATGAACTCCAATTTGCTAGCCAGAGCAATTCTTCCTTGCTCCACTAGCATGGCAACACTCTCAGCTTCAGCACCATTCCCCACTGTGACTTTGGACCTCACACACAACCCCAATCCATCGCAATTTCAAAGACCTGCTGTTCCATTCCAACTACCCTTCCTCCCAGGGCAGCCTCAGAACTTTGGGTCAGGAGCCACCCCAATTGCACAAGCACAAGCACAAGCACAAGCACTTTATAACCAATCCAAATTCTCTGGTCTTCAGTTATCTCAGGAAGTAGGATCTTCCCAATTAGCCCCTCAAGCTCCTAGACCCCCCTTGCAGCCAAGCCAACCGCCTTCCCTGGCTGACACAGTCACTGCTGCCACAGCCGCCATAACTGCCGACCCCAACTTCACCGCCGTGCTTGCTGCCGCCATCTCCTCCATCATCGGCGGTGCTAATGCGAACAACAATAACACCAGCAATAACAACAACAGCACCAGCAGGACTACCATTAGCAGTTTTTCAGGAAATTAA	1716	0.4872	MDKGWGLTLDTSSSQSLPLFPSKQPSATSFSNDRMFPLLGFPVNLSRAANKEDDDHRKVVGEVDFFSDRNKPTPTPSLHQNVKPNIIKKEIDETPLHVNTGLQLLTANTGSDQSTVDDGVSSDAEDKRAAKTTELVQLQVELQRMNAENKKLKEMLSHVTGNYTALQMHFMTLMQQNQRTENEVVEGKVEDKNHGVGGGKVARQFLEIGPSGTGEVDEQVSDSSSDERTRSSTPQNNNNIEGGTRDGARNNNGKHELGREESPESESQGGWASNKIQKVNPSNAMDQSTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNSNLLARAILPCSTSMATLSASAPFPTVTLDLTHNPNPSQFQRPAVPFQLPFLPGQPQNFGSGATPIAQAQAQAQALYNQSKFSGLQLSQEVGSSQLAPQAPRPPLQPSQPPSLADTVTAATAAITADPNFTAVLAAAISSIIGGANANNNNTSNNNNSTSRTTISSFSGN	571

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4751g00001	571	Coils	Coil	128	162	-	-
	Mupr4751g00001	571	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	104	559	IPR044810	GO:0003700
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	493	515	-	-
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	248	263	-	-
	Mupr4751g00001	571	FunFam	probable WRKY transcription factor 31	295	372	-	-
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	208	304	-	-
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	109	128	-	-
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	266	295	-	-
	Mupr4751g00001	571	Pfam	WRKY DNA -binding domain	312	369	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	7	28	-	-
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	547	571	-	-
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	226	246	-	-
	Mupr4751g00001	571	SUPERFAMILY	WRKY DNA-binding domain	303	371	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr4751g00001	571	ProSiteProfiles	WRKY domain profile.	305	371	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr4751g00001	571	SMART	WRKY_cls	310	370	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr4751g00001	571	MobiDBLite	consensus disorder prediction	1	28	-	-
	Mupr4751g00001	571	Gene3D	WRKY domain	295	372	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4751g00001	Mupr-Chr4751	1670	4024	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4751g00001	1	557	WRKY Transcription Factor Family	AT1G62300	51.208	2.52e-164	478

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mupr4751g00001		WRKY	6e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4751g00001	-		-	gmx:100802124	827.394