LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4749g00001	ATGGCTTGCAAGAGCATTCAAAGTGGTTCTTCATCTCATATGAGAAGGAAATACGATGTGTTTGTGAGCTTTAGAGGTGACACACGCAACAACTTCACGGATCATCTCTTTGGTGCCTTCCAAAGAAGAGGCATTGTCACCTTCAGGGATGACAAAAAGCTGAAGAAAGGTGAACCCGTGGCACCTGAATTGCTGCAAGCAATTGAAGGGTCTCGGGTTCTCATTGTGATCTTCTCAAAGAACTATGCTTCCTCAACATGGTGCTTGCGAGAACTTGAGAAGATCTTTGAGTGCCTTCAAGTCTCTGGTAAATGTGTTCTTCCTATTTTCTATGATGTTGATCCATCTGAGGTGCGTAAACAAGGTGGAGATTTTGAGAAAGCCTTTGCCAAGCATGAAGAAAGATTCAAACTTGATTCATGTATGATGATGAAAGTGCAAAGATGGAGGGAAGCTCTCACACAAGTGGCCAATCTCTCTGGTTGGGATGTGCGAGATAAGCCACAATATGTAGAGATTGAAAATATTGCTGAAGAGATAATAAGAACTTTGAGTCACAAACTTTCTAGTCTTCCACATGATCTTGTTGGGATGCAATATCCAGTACAAGAATTAGAAAAACTTCTACTTTTGAGCTCAATCGATGATGTCCGGGTTGTAGGAATTTGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCTACTATTTTATATGACAGAATTTCTCATCATTATGATGCTTGCTGCTATATTGGTGACGTAAGCAAAATTTATAGAGATCATGGTCCAATTGGTGTACAAAAGCAACTTCTACATCAAACTTTAAATGATGAAAACCTTCAAATTTGTGAGCTTTCTAAGGTAACCAATTTGATACAAGATAGGCTTTGCCATGTAAGGGCCTTTATAGTTCTTGATAATGTTGATCAGATTGAACAACTGGAAAAATTAGCTATTAATCGGGAATGGTTAAGCGCAGGGAGTAGAATCGTCATAATTTCCAGAGATGAACATATCCTACAAATGCATAAAGTGGACAAAGTTTACAATGTTCAACTCTTGAATTGGGACAACTCTCTTAAATTATTTTTCAAAAAAGCTTTCAGATGTGATGACATTAGAAGTGATTACAGAGAGTTGACATATGATTTACTAAAATATGCTAATGGTCTACCTTTGGCAATTAAAGTGTTGGGATCTTTTTTGTTTGGTCGAGATGTGTCTGAATGGAGAAATGCATTGGCTCAATTGAGAGAAAATCCATGCAAAGATATGATGAGAGTGTTGCAATTATGTTTTGATGGACTAGAGGAAATGGAAAGAGAAATATTTCTAGATATTGCTTGTTTCTTCAATGGGAATGAGGAGCAATATGTTAAGAAGGTTCTAAATTGTTGTGGATTTCATCCTGATATTGGAATAAGAGTTCTCATTGATAAATCACTTATAACCATTTCAAACAGTTTGATTGAAATGCATGATTTGTTGGAAGAGTTGGGAAGGAAAATTGTTCAAAAAAATTCTTCTAAGGAGTCAAAAAAGTGGAGCAGGTTGTGGCTTGACAGATGTTTCTACAATGTTATGTTGGAGAATATGGAAACAGAATACATTGAAGCCATAGTTTTGAGTTGTGCAAAAGAAGGGGAAGTATTGATGGCTGAAACACTGTCAAAAATGAGTCGCCTTAGATTGCTTGTATTGAATAATATGAATTTTCAAGGAAGTCTTAATTATCTTTCCAATGAATTAAAGTATCTGTTCTGGGACAAATATCCTTTCATGTCTTTGCCATCAAGTTTTCAGCCGGACAAACTTGTTGAATTGATCCTCACCGGTAGTAACATTAAACATCTATGGGAAGGCACAATGCAACCTCTACAAAATTTGAAATGTATGGATCTCTCACACTCCACAAATCTTATCAAGATGTCAGACATTGGACAGATCCCAAATCTTGAGTCACTAATTCTTGAAGGATGTACAAAACTTGTGCAGATAGATTCATCCATTGTTCTAAAAAAGCTTATTCTCTTGAATTTGAAAAACTGCAAGAGTCTAGCATGTATACCTAAATGCATACTGGATCCCTGTTCTCTTGAATATCTAAATCTCTCTGGCTGTTCAAGATTAGATAAAGAATTTTTTTGTTGCTTGTTGCCTTCCTTGCATTGTTTGCGTGACCTTGACATTAGCTTTTGTAATCTATGCCAAATCCCTCATGGTATTGGATGTTTAGGTTGTTTAGAAAGACTAAATTTAGGGGGAAACAATTTTGTTAAACTACCTTGTGACCTAAGGAAGCTTTGCAATCTTGTATATTTAAACTTGGACCATTGCAAGCAGTTGAAATATTTGCCTGAGCTCCCTTTACTTACTTGCTTGCCAACAAGAGAAGTTGCTTGGGGTACAAGGCGACCGGGATTATATATTTTCAACTGCCCAGAATTGGGTGAGAAAGAAAGATGCTGCAGCCTGACTTTGTCATGGATGAGACAAATGCTTCAGGTGCACACTCCTTCCTTTGTTCTCCTATATCTATGTGTCCGTGTGAACCAAGAAACCATTTCCCCCTTTGATGAGATTGATATTATTATTCCTGGAAGTAAAATACCAAGGTGGTTCAACAATCAGAGTGAGGCTAGTTCAATAAGCATAGACCCAGCTCCTACTTTGCATAACAATAATTGGACTGGCATTGCTTGCAGTGCAGTATTTGCAGTTCATCCAACTAATTTGAGAAATGAATGGGAGCCCTCTATAAAGATAGGTTTTCAGAAAAGGAGTGACAAGTTTACCACAATTCCGGTAATTCTCAATAGAGATCTGATCTCGATTGAGTCAGATCACATGTGGATATTCTATTTCACTAGAGAAGAATTCATTGATATTGTGAGTCATATAACTGGCAAAACTGAAGAAGCATATGATCTTGGTGGCATCAAATTGACAACTGTAATCAGGCATGGGCAAGGTTTACATGTGGAGGTGAAGAGTTGCGGACATTCACTGATCATTTCAACCGATACAGAGACAATCAGAGAGACCAAGTGCTATGCCATGCTGTCTGTGAAACTGTGA	3078	0.3762	MACKSIQSGSSSHMRRKYDVFVSFRGDTRNNFTDHLFGAFQRRGIVTFRDDKKLKKGEPVAPELLQAIEGSRVLIVIFSKNYASSTWCLRELEKIFECLQVSGKCVLPIFYDVDPSEVRKQGGDFEKAFAKHEERFKLDSCMMMKVQRWREALTQVANLSGWDVRDKPQYVEIENIAEEIIRTLSHKLSSLPHDLVGMQYPVQELEKLLLLSSIDDVRVVGICGMGGIGKTTLATILYDRISHHYDACCYIGDVSKIYRDHGPIGVQKQLLHQTLNDENLQICELSKVTNLIQDRLCHVRAFIVLDNVDQIEQLEKLAINREWLSAGSRIVIISRDEHILQMHKVDKVYNVQLLNWDNSLKLFFKKAFRCDDIRSDYRELTYDLLKYANGLPLAIKVLGSFLFGRDVSEWRNALAQLRENPCKDMMRVLQLCFDGLEEMEREIFLDIACFFNGNEEQYVKKVLNCCGFHPDIGIRVLIDKSLITISNSLIEMHDLLEELGRKIVQKNSSKESKKWSRLWLDRCFYNVMLENMETEYIEAIVLSCAKEGEVLMAETLSKMSRLRLLVLNNMNFQGSLNYLSNELKYLFWDKYPFMSLPSSFQPDKLVELILTGSNIKHLWEGTMQPLQNLKCMDLSHSTNLIKMSDIGQIPNLESLILEGCTKLVQIDSSIVLKKLILLNLKNCKSLACIPKCILDPCSLEYLNLSGCSRLDKEFFCCLLPSLHCLRDLDISFCNLCQIPHGIGCLGCLERLNLGGNNFVKLPCDLRKLCNLVYLNLDHCKQLKYLPELPLLTCLPTREVAWGTRRPGLYIFNCPELGEKERCCSLTLSWMRQMLQVHTPSFVLLYLCVRVNQETISPFDEIDIIIPGSKIPRWFNNQSEASSISIDPAPTLHNNNWTGIACSAVFAVHPTNLRNEWEPSIKIGFQKRSDKFTTIPVILNRDLISIESDHMWIFYFTREEFIDIVSHITGKTEEAYDLGGIKLTTVIRHGQGLHVEVKSCGHSLIISTDTETIRETKCYAMLSVKL	1025

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4749g00001	1025	ProSiteProfiles	TIR domain profile.	16	188	IPR000157	GO:0007165
	Mupr4749g00001	1025	Gene3D	-	354	437	IPR042197	-
	Mupr4749g00001	1025	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	18	805	IPR044974	GO:0006952
	Mupr4749g00001	1025	SMART	till_3	17	159	IPR000157	GO:0007165
	Mupr4749g00001	1025	Pfam	NB-ARC domain	201	423	IPR002182	GO:0043531
	Mupr4749g00001	1025	Pfam	C-JID domain	865	1009	IPR045344	-
	Mupr4749g00001	1025	PRINTS	Disease resistance protein signature	388	402	-	-
	Mupr4749g00001	1025	PRINTS	Disease resistance protein signature	295	309	-	-
	Mupr4749g00001	1025	PRINTS	Disease resistance protein signature	624	640	-	-
	Mupr4749g00001	1025	PRINTS	Disease resistance protein signature	219	234	-	-
	Mupr4749g00001	1025	SUPERFAMILY	L domain-like	552	814	-	-
	Mupr4749g00001	1025	FunFam	Disease resistance protein (TIR-NBS-LRR class)	14	186	-	-
	Mupr4749g00001	1025	SUPERFAMILY	Toll/Interleukin receptor TIR domain	8	162	IPR035897	-
	Mupr4749g00001	1025	Gene3D	-	184	351	IPR027417	-
	Mupr4749g00001	1025	Pfam	TIR domain	17	190	IPR000157	GO:0007165
	Mupr4749g00001	1025	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	188	447	IPR027417	-
	Mupr4749g00001	1025	SUPERFAMILY	"Winged helix" DNA-binding domain	425	522	IPR036390	-
	Mupr4749g00001	1025	Gene3D	Ribonuclease Inhibitor	520	800	IPR032675	-
	Mupr4749g00001	1025	Gene3D	-	16	183	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4749g00001	Mupr-Chr4749	3735	9515	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4749g00001	16	787	WRKY Transcription Factor Family	AT4G12020	31.824	2.67e-94	328

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4749g00001	-		-	gmx:100820213	1137.87