Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4742g00006 ATGTCAAATTTGCATTTTATTTTCTATGGTTTAGTAGTTATTCTTCTTCTACAAAATCCCAGTGCAACACAATGCCATACGAAGGGAATTCGACCTAAGCCAGGGAATGGGCTATCTACCAATATGACCAGAGTCCAATTTTCAGAACAACAGTTCATGAAATGGGTGAGATTTGTGGGTGGCCTCAAACATTCTGTCTTTAGGACAGCAATGAATAAGCTTTTTCCTTCTCACACTTTGCACGTTTCTAAGAAGCCAAGTAAAGGAGGGTTTTCGTCAATTCAAGCGGCCATTGATTCCCTTCCATTCATCAATGTAGTGAGAGTGGTAATCAAGGTCCATGCAGGGGTTTACACGGAGAAAGTTAACATTCCTCCTTTCAAATCGTACATAACAATACACGGAGCAGGCGCAGATAATACCATTGTTCAATGGGGTGACACTGCTCAAAGCCAGCCTTTAGGAACCTATGGTTCTGCAACTTTTGCAGTGAATTCACCTTATTTCATAGCCAAGAACATCACATTCAAAAACACTACCCCAATTCCAGCACCAGGAGCAATTGGAAAACAGGCAGTGGCATTGAGAATTTCAGGAGATACAGCAGTATTCCTAGGCTGCAAATTCTTAGGAGCACAGGACACACTCTATGATCATGTGGGTAGGCATTACTATAAGGATTGTTATATTGAAGGCTCTGTTGATTTCATATTTGGTAACGCGCTCTCTCTCTTTGAGGGATGTCACGTGCATGCCATAGCACAACTTACAGGGGCCCTAACAGCACAAGGGAGGAGCAGTTTTTTAGAAGACACGGGTTTCTCGTTTGTTCACTGTAAGGTCACGGGCTCAGGGGCACTTTACCTTGGAAGGGCTTGGGGTCCCTTTTCTCGCGTTGTCTTTGCCTACACTTACATGGACAACATCATCATTCCCAAAGGATGGTATAACTGGGGCGACCCTAACCGTGAAACGACTGTATTCTATGGACAGTACAAATGCACAGGACCAGGAGCAAGCTACGCGGGGAGAGTATCATGGTCAAGGGAACTTACCGATGAGGAAGCCAAGCCATTTATTTCACTTAGCTATATTGACGGCTCTGAATGGATCAATCTTTCTCTTTGA 1128 0.4388 MSNLHFIFYGLVVILLLQNPSATQCHTKGIRPKPGNGLSTNMTRVQFSEQQFMKWVRFVGGLKHSVFRTAMNKLFPSHTLHVSKKPSKGGFSSIQAAIDSLPFINVVRVVIKVHAGVYTEKVNIPPFKSYITIHGAGADNTIVQWGDTAQSQPLGTYGSATFAVNSPYFIAKNITFKNTTPIPAPGAIGKQAVALRISGDTAVFLGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQLTGALTAQGRSSFLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNRETTVFYGQYKCTGPGASYAGRVSWSRELTDEEAKPFISLSYIDGSEWINLSL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4742g00006 375 Gene3D - 76 374 IPR012334 -
Mupr4742g00006 375 ProSitePatterns Pectinesterase signature 2. 230 239 IPR033131 -
Mupr4742g00006 375 Pfam Pectinesterase 86 367 IPR000070 GO:0030599|GO:0042545
Mupr4742g00006 375 SUPERFAMILY Pectin lyase-like 76 373 IPR011050 -
Mupr4742g00006 375 FunFam Pectinesterase 76 373 - -
Mupr4742g00006 375 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4742g00006 Mupr-Chr4742 33300 36243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4742g00006 91 374 Carbohydrate Esterase AT1G05310 48.630 1.46e-99 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4742g00006 K01051 - gmx:100802832 738.413