Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4741g00001 ATGTTAGCCAATAACTTATCTCCATCGTCAGTTCCCACTTCTGAGCCTTTTCCCTGCACTGAAAATGGCACTGCCACCAATAAAAGGAAGAGAAGGCCCGCAGGAACTCCAGATCCGGATGCAGAAGTGGTGTCCCTCTCGCCGAAGACTTTGTTGGAATCAGATCGTTATGTGTGTGAGATCTGCAACCAGGGGTTCCAGAGGGACCAGAACCTTCAGATGCATAGGAGGAGGCACAAGGTGCCATGGAAGCTATTGAAGAGGGAGACACCAGTGGTGAGGAAGAGAGTGTTTGTGTGTCCTGAACCAACTTGCTTGCACCATGACCCATGTCATGCCTTGGGTGATCTTGTTGGGATAAAGAAGCACTTCAGAAGGAAGCACAGCAATCACAAGCAATGGGTCTGTGAAAGATGCTCCAAAGGCTATGCAGTGCAGTCTGATTACAAAGCTCATCTCAAAACGTGCGGCACCCGGGGCCACTCTTGTGATTGTGGTCGAGTTTTCTCAAGGGTGGAGAGTTTCATTGAGCACCAAGATGCTTGCAACATGGGGAGACTCAGGCCTGAATCTCAACCACTTCAACCATCTGCATGCTTGTCTAGAACAGCCTCAAGCCCAAGTCCTTCAAGTGAAACCAATTTCAGCACAGCTCCATGGCCAACAAGAATGATAATACCAAAGCCAACAGAACAACACACAATCTTCATGAATAACCCTACCACTGCTATCACCAATGCTGAAACCTCATCCAAGAACAACAAGCTCCACCCCAACTTGGATCTTCAACTCTCCACCCCCATCACCACCATCAACAACAACACCAACACCAACACATCAAATATTGCAAACCCCATCGATGCTACATCACTATCACCTAAGAGAGATCACCATGAAAACCATTCAACCCATTTGCAACTCTCAATTGGCTCATCAGACATGAGTGAGAAAAATGAATCAAACAGGAACTCATCAGAGAACAGCAACAACGATCAGAAGCAGTCCAACATGGCCTTGTTGAGGGTTCAAGAGCAAGCGAGGGAACACTTGAGGATAGCCATGGCAGAGAAAGCTTATGCTGAGGAAGCAAGGAAACAAGCCAAGAGGCAAATTGAACTTGCGGAACAAGAGTTCACAAACGCCAAGAGGATAAGACAACAAGCACAAGCCGAACTAGACAAGGCCTACGCATTGAAAGAACATGCAATGAAGCAAATCAACTCCACCATGCTCCAAATCACTTGCCACGCTTGCAAACAACAGTTCCAAGCGAGAAACCATGCAACCCCGGACGAGAATTCCTTGGTCTTGAGCTACGTGTCTTCTGCAATAACCACGGAAGGAGGAGAAGTAGAAAACGATAATGGAAAAGACCATGTTCATGGCAAACAAAACTAA 1398 0.47 MLANNLSPSSVPTSEPFPCTENGTATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRPESQPLQPSACLSRTASSPSPSSETNFSTAPWPTRMIIPKPTEQHTIFMNNPTTAITNAETSSKNNKLHPNLDLQLSTPITTINNNTNTNTSNIANPIDATSLSPKRDHHENHSTHLQLSIGSSDMSEKNESNRNSSENSNNDQKQSNMALLRVQEQAREHLRIAMAEKAYAEEARKQAKRQIELAEQEFTNAKRIRQQAQAELDKAYALKEHAMKQINSTMLQITCHACKQQFQARNHATPDENSLVLSYVSSAITTEGGEVENDNGKDHVHGKQN 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4741g00001 465 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 402 IPR031140 -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 271 288 - -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 194 220 - -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 271 335 - -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 1 44 - -
Mupr4741g00001 465 Gene3D Classic Zinc Finger 119 195 - -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 304 335 - -
Mupr4741g00001 465 SUPERFAMILY beta-beta-alpha zinc fingers 56 154 IPR036236 -
Mupr4741g00001 465 Gene3D Classic Zinc Finger 35 97 - -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 1 24 - -
Mupr4741g00001 465 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Mupr4741g00001 465 Coils Coil 350 405 - -
Mupr4741g00001 465 Pfam Zinc finger, C2H2 type 57 79 IPR013087 -
Mupr4741g00001 465 MobiDBLite consensus disorder prediction 193 223 - -
Mupr4741g00001 465 SMART c2h2final6 134 161 IPR013087 -
Mupr4741g00001 465 SMART c2h2final6 98 128 IPR013087 -
Mupr4741g00001 465 SMART c2h2final6 57 79 IPR013087 -
Mupr4741g00001 465 FunFam protein indeterminate-domain 12-like 36 104 - -
Mupr4741g00001 465 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4741g00001 Mupr-Chr4741 20504 23572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4741g00001 20 453 C2H2 Transcription Factor Family AT2G01940 55.730 7.02e-155 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4741g00001 zf-C2H2 0.0044 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4741g00001 K25871 - gmx:100800187 814.298