Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4740g00002 ATGATTCCTTGGGGTGGTCTCAGTTGCTGTTTGAGTGCCGCTGCTCTTTACCTTCTCGGCAGAAGCAGTGGCAGGGATGCGGAACTTCTTAAATCCGTTACAAGGGTCAATCAGTTGAAGGAACTAGCTCAACTGTTAGATGCGGAAATATTACCCTTGATTGTTACAATTTCTGGAAGAGTTAGCTCTGAAACCCCAGTTAACTGCGAGTTCAGTGGTTTAAGAGGTGTAATAGTTGAAGAAACAGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCCTGGATACAAGATTCCGCTTTGATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGACTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCCACTGGTTTTGTATTACCTGTTGGGAGTGAGGCATTTGAAGAGTCGGGTCGGTCACTTGTACGTGGAACATTGGATTATCTTCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGAGTACTTCCAGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGACCATTCGAATTCAACGACCCCACAAAGGGCCATTTTATGTCTCTCCAAAAACAATTGATCAACTAATTGCAAATCTGGGGAAATGGGCAAGGTGGTATAAGTATGCTTCTATGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCCAAGCATGCTATTCGGTACATATTGGAAAGACGGGACCGCAAGGAACTTCAAAGAAGGGTTCTCGCCGCAGCTGCTAAGAAATCAGGACAAAATGATGAAGTTGAAAAGGCTGACAGCTTATCAGATGGTGCTAAAAGGGATCGCTTAATGCCAGATTTGTGTGTAATATGCCTCGAGCAGGAATATAATGCTGTGTGGGCATATGTGCTGCTGTACAGCTTGTTCTTCACACTTGACCAATTGTCCTCTCTGCCGGCGACAGATAGAGAAGGTTGTGAAGACTTTCCGTCATTGAGTGTTAATCATACTTGGAAGCCAACTAAATAA 1041 0.4438 MIPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLDAEILPLIVTISGRVSSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTDRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAIRYILERRDRKELQRRVLAAAAKKSGQNDEVEKADSLSDGAKRDRLMPDLCVICLEQEYNAVWAYVLLYSLFFTLDQLSSLPATDREGCEDFPSLSVNHTWKPTK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4740g00002 346 PANTHER - 1 304 IPR044231 GO:0004842|GO:0016567
Mupr4740g00002 346 Pfam E3 Ubiquitin ligase 85 233 IPR022170 GO:0004842|GO:0006996|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4740g00002 Mupr-Chr4740 7983 12150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4740g00002 1 271 C3H Transcription Factor Family AT1G63900 76.923 2.75e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4740g00002 K15688 - gmx:100803252 568.155