LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4734g00007	ATGCATTTTTTGGGGGGAAGCAAGGTTGTGCAGTTCAGACCTGAAAGAAACTTAAAGTCAATCACTGAGACATCTTTGAACTCGGATGATCCAACATCAGACCCATGTCCAACTTGTTCGTCACCCTTTTTCATCTTCCGTCAGCCTCTGGCTGAAGAAATTGAAAATGGGGAGCAGGCTAATGTTGTGGTTGTGGACAAAAATAAAAAGCATGACCATGACTTGAATAGGAAACCTAGAAAGTCTGTTGTGCCTCCTAAGCCTAGTGATGAGAACCTCCGCTCCTTAATTATCCGTATCATGGGGCATGTGGATACTGGGAAAACCAAACTACTAGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGACGGTATCACACAACAGATTGGTGCAATATACTTTCCTGCTGAGAATATATGTGAAAGAACGAAGGAACTGAAAGTTGATGCAAAGCTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACAAGTCATTTACTAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGATTGGAGCAACAAATAATAGAATCACTAAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTGAATATGGTTGACAAGCTTTATGGGTGGAAGACATGTTGCAATTCTTCAATTGTTAAAGCAGTGAAGCAGCAAACAAGGATGTTCAAAACGATTTTAATATGA	753	0.4037	MHFLGGSKVVQFRPERNLKSITETSLNSDDPTSDPCPTCSSPFFIFRQPLAEEIENGEQANVVVVDKNKKHDHDLNRKPRKSVVPPKPSDENLRSLIIRIMGHVDTGKTKLLDCIRGTNVQEGEADGITQQIGAIYFPAENICERTKELKVDAKLKVPGLLVIDTPGHKSFTNLRSRGSGLCDIAILVVDIMHGLEQQIIESLNLLKMRNTEFIVALNMVDKLYGWKTCCNSSIVKAVKQQTRMFKTILI	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4734g00007	250	PANTHER	TRANSLATION INITIATION FACTOR IF-2-RELATED	58	244	IPR015760	-
	Mupr4734g00007	250	NCBIfam	small GTP-binding protein domain	98	223	IPR005225	GO:0005525
	Mupr4734g00007	250	PRINTS	GTP-binding elongation factor signature	97	110	IPR000795	GO:0003924\|GO:0005525
	Mupr4734g00007	250	PRINTS	GTP-binding elongation factor signature	213	222	IPR000795	GO:0003924\|GO:0005525
	Mupr4734g00007	250	PRINTS	GTP-binding elongation factor signature	161	171	IPR000795	GO:0003924\|GO:0005525
	Mupr4734g00007	250	PRINTS	GTP-binding elongation factor signature	177	188	IPR000795	GO:0003924\|GO:0005525
	Mupr4734g00007	250	MobiDBLite	consensus disorder prediction	67	87	-	-
	Mupr4734g00007	250	ProSiteProfiles	Translational (tr)-type guanine nucleotide-binding (G) domain profile.	93	250	IPR000795	GO:0003924\|GO:0005525
	Mupr4734g00007	250	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	94	243	IPR027417	-
	Mupr4734g00007	250	CDD	IF2_eIF5B	97	225	-	-
	Mupr4734g00007	250	Pfam	Elongation factor Tu GTP binding domain	96	231	IPR000795	GO:0003924\|GO:0005525
	Mupr4734g00007	250	Gene3D	-	87	249	IPR027417	-
	Mupr4734g00007	250	MobiDBLite	consensus disorder prediction	67	89	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4734g00007	Mupr-Chr4734	38314	39800	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4734g00007	90	243	Eukaryotic Initiation Factors Gene Family	AT1G76810	85.714	4.35e-85	273

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4734g00007	K03243		-	gmx:100814875	304.293