Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4730g00004 ATGGGTGAAACCGCGGAAACTGAAGAAAGGCCCAAATTCAGAGATATTAGACGCTATTTCTGCCAGTACTGCGGTATCTGCAGATCCAAGAAAACCCTTATTGCCTCTCATATCAATTCTCACCACAAGGAGGAGGCGGAAAAAGCAAGAGCTGTAAGAGATCCCGAACACGAGGCCGTGAAATCCAACACGTGCGAAGAGTGTGGTGCCACTTTCAAGAAACATGCCTACTTGTTGCAGCACATGCTAAGTCATTCGCCTCAGGAAATTAATCTATAA 279 0.4588 MGETAETEERPKFRDIRRYFCQYCGICRSKKTLIASHINSHHKEEAEKARAVRDPEHEAVKSNTCEECGATFKKHAYLLQHMLSHSPQEINL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4730g00004 92 SUPERFAMILY beta-beta-alpha zinc fingers 17 85 IPR036236 -
Mupr4730g00004 92 Gene3D Classic Zinc Finger 2 90 - -
Mupr4730g00004 92 PANTHER ZINC FINGER PROTEIN 5 87 - -
Mupr4730g00004 92 Pfam Zinc finger, C2H2 type 64 85 IPR013087 -
Mupr4730g00004 92 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Mupr4730g00004 92 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Mupr4730g00004 92 SMART c2h2final6 19 41 IPR013087 -
Mupr4730g00004 92 SMART c2h2final6 63 85 IPR013087 -
Mupr4730g00004 92 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4730g00004 Mupr-Chr4730 7879 8461 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4730g00004 zf-C2H2 0.00093 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4730g00004 K09191 - gmx:100801812 152.14