Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr472g00005 ATGGATGATGGAGAAATTTCAAATGCTTTCCCTCACCAAAACCCATCAACTGCTGCATCTAATAACCAGCCTCCTTCTTTGAAAAGGAAGAGAAACCTCCCTGGAAACCCAGGCAAGCTTGTTCTTTATTTCATGCCTTGTTATCATTCTCAGCATCTTTATCCTGAAGCTGAGGTCATAGCCCTATCACCAAAGACTCTGATGGCCACAAACAGATTCGGCTTCCAAAGGGACCAAAACCTTCAGCTCCATCGACGAGGGCACAACCTTCCTTGGAAGCTGAAGCAGAGAACAAGCAAAGAAGTAAAGAAGCGAGTTTATGTGTGTCCCGAGAAGAGTTGTGTCCACCACCACCCTTCAAGGGCTCTGGGAGACTTAACTGGGATAAAAAAGCACTTCTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGTTATGCTGTGCAGTCAGATTGGAAAGCACACTCAAAAACCTGTGGCACCAGAGAATACAAATGTGACTGTGGCACTGTCTTTTCACGGAGGGATAGCTTCATCACTCACAGGGCCTTCTGTGATGCCTTAGCAGAAGAAACAGCTAGGGTGAATGCAGCATCAAACATGAGCAACTACAGCGTCTTGCAAAACCCCCTTGGTCCTAACATGGCAACACATTTTTCATCATTTTTCAAGTCAAATCCATGCACTGAGGAACCAGGTAATCAAACATCTAAGGGCCTATCCCTTTGGATGACTCAAACATCTCAGGCTCATGAGACAATTACTAACAACAATTTGCATGAATTTCATCAACTTGGGTCAGCCACAAGCCCGACAGCAATATATAATAGTGGTGGGAATCCTCTTGCTTCATGCTCAAATCCACCACCCTCTAATTACCAGCTAAATTGGGTGTTTGGAAACAAAATCTCCTCCAATGGAAGCCATCAAGAGCTAACTAGCACTGCTTCACTTCCACTAGTCAATAACATTGTTAAGGATAACCCAAACCTGCAACTCATAAGTGTTCCTTCCTTGTATAGCTCACAACACTATTCCCATCAAACAACCTCAGCAAACATGTCAGCCACAGCTTTGTTGCAAAAAGCTGCACAAGTTGGGACTACTTCATCGGACCCATCATTATTCCTTGGGAGCATAGGTTTGAAATGCAACAGTCCAGGTCAAGATGGGAACAAATTTTGTGGCATGTACGGTTCAAGTTCAGTGCTAACAAGTCATGCAAGCGAGGCGGAGAATAATTATTCTGGTGATTTGTCACAAATGCCCCCTACAAAACGACGGCACGTACAGAATGAAGAGAGTGCATGGGGACAAACTAGGGATTTTCTTGGCGTTGGTGGTGCCAACCATTTGCCACCCTTCATCAATCAACGGATGGATTTGATTTGA 1407 0.4478 MDDGEISNAFPHQNPSTAASNNQPPSLKRKRNLPGNPGKLVLYFMPCYHSQHLYPEAEVIALSPKTLMATNRFGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETARVNAASNMSNYSVLQNPLGPNMATHFSSFFKSNPCTEEPGNQTSKGLSLWMTQTSQAHETITNNNLHEFHQLGSATSPTAIYNSGGNPLASCSNPPPSNYQLNWVFGNKISSNGSHQELTSTASLPLVNNIVKDNPNLQLISVPSLYSSQHYSHQTTSANMSATALLQKAAQVGTTSSDPSLFLGSIGLKCNSPGQDGNKFCGMYGSSSVLTSHASEAENNYSGDLSQMPPTKRRHVQNEESAWGQTRDFLGVGGANHLPPFINQRMDLI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr472g00005 468 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 18 452 IPR031140 -
Mupr472g00005 468 MobiDBLite consensus disorder prediction 9 29 - -
Mupr472g00005 468 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Mupr472g00005 468 MobiDBLite consensus disorder prediction 1 34 - -
Mupr472g00005 468 Gene3D Classic Zinc Finger 135 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr472g00005 Mupr-Chr472 40726 43246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr472g00005 24 452 IDZ Gene Family AT1G03840 49.380 4.40e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr472g00005 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr472g00005 K25870 - gmx:100778666 821.617