Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr472g00004 ATGACTCAGTGCAGCTACCCTAAAAACAACCATAGCATCATTGTGGAGAGGCACAAAGATAGCTTGATCAGAACATGTCCTACATGTGGTCATCATATCAAATGCCAAGAGCAGGCTTCTGGAATTCATGACTTGCCTGGACTTCCTGCTGGAGTGAAGTTTGATCCTACTGATCAGGAGATTCTTGAACATTTGGAAGCGAAGGTGCGCTCTGATATTCACAAGCTTCATCCCTTAATTGATGAGTTCATCCCTACTCTTGAAGGGGAGAATGGAATCTGCTGTACCCATCCAGAGAAGTTACCAGGAGTTGGCAAAGATGGGTTGATCCGACATTTCTTTCACAGGCCTTCCAAAGCATACACGACCGGAACAAGGAAAAGGAGAAAGGTGCACACAGATGCGGATGGCAGTGAGACTCGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTACATCAGTGGCAGGTTAAAAGGGTACAAGAAAATTCTTGTGCTTTACACCAACTACAGAAAACAAAGGAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTGGTGGTCTCCAAAGTTTTCTATCAAACACAGCCTAGACAATGTGGTTCACTCATGAAAGACTCATATCCTGCAAAACTAAATGGTGAAGGCGTGCATGAGGTAACTAATCATAAGAACACTGGGTTTGTCGAGTACTACAATAATTCTTTTGTATCCTTTGATCAAGGGGATCAGCATAGGTCTAGCAGTGCTCAACTGGTCTCTCATTTCCCTGTCCATGATGGTGCTACTTTCATTCCTTGA 840 0.4452 MTQCSYPKNNHSIIVERHKDSLIRTCPTCGHHIKCQEQASGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVYISGRLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKDSYPAKLNGEGVHEVTNHKNTGFVEYYNNSFVSFDQGDQHRSSSAQLVSHFPVHDGATFIP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr472g00004 279 MobiDBLite consensus disorder prediction 124 143 - -
Mupr472g00004 279 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
Mupr472g00004 279 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Mupr472g00004 279 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Mupr472g00004 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 237 IPR044799 GO:0003700
Mupr472g00004 279 FunFam NAC domain-containing protein 73 57 211 - -
Mupr472g00004 279 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Mupr472g00004 279 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr472g00004 Mupr-Chr472 31980 33564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr472g00004 24 224 NAC Transcription Factor Family AT4G28500 80.693 6.67e-118 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr472g00004 NAM 6e-22 No_clan