Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr472g00002 TGCAAACAAGCTCACAAGCTGACGAAGCGAAAGAGAGAACGAGAAGAACTAGACCCATCGGACATGGGTGTTGACTATTACAAGATCCTTCAGGTCGATAAGAATGCCAAAGACGACGACCTCAAAAAGGCTTACAGAAAGCTCGCCATGAAATGGCACCCCGACAAGAACCCCACCGACAAAAAGGATGCTGAATCCAAATTCAAACAAATCTCTGAAGCATACGAGGTGTTGAGTGATCCTCAGAAGAGAGCTGTCTATGACCAATATGGGGAAGAGGGTCTGAAGGGTCAGGTGCCACCTCCTTCTGGGGGCGGAGGAAGCACTTTCTTTTCGAGCGGCGAGATTCCGACGTCGTTTCGGTTCAACCCTCGTAGTGCTGATGACATTTTTGCTGAGTTCTTTGGGTTTGAGGGAGACATGGGAAGAGGGGGTGGCACGAGGTCGAGGTTCCCTTTTGGTGATGACGTGTTTAGGTCTTTTGGGGATGGAGGAGGGGGGGTCCATATGAGTCAAGGTGCTTCTCGCAAGGCTGCTCCCATTGAGAACAAGTTGCCATGCTCTCTCGAGGAGATTTATAAAGGTACCACCAAGAAGATGAAGATCTCTAGGGAAATTGTTGATGCCAGTGGTTACAACAAAACTGCACAGGTGGAGGAGATCTTGACAATTGACGTCAAGCCTGGTTGGAAGAAGGGGACGAAGATCACCTTCCCAGAGAAGGGAAACGAACAGCCAAATGTGACACCTGCAGACCTTGTTTTCATCATTGATGAAAAACCGCACAGTGTCTTCACTCGTGAAGGAAATGATCTCATAACCACCCAAAAGATTTCTCTTGTAGAAGCCTTGACTGGTTGTACCGTGAACCTGACTACACTGGATGGTAGAAACCTAACTGTACCAATCAACAATGTTGTTCATCCTGAATATGAGGAGGTTGTTGCAAGAGAAGGAATGCCTCTCCCAAAGGATCCAACAAAGAAGGGAAACTTGAGGATAAAGTTCAGCATCAAATTCCCAGCTCGCCTCACTGCGGACCAAAAGGCAGGAGTCAAGAAACTCTTGGCTGCCTGA 1077 0.48 CKQAHKLTKRKREREELDPSDMGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPTDKKDAESKFKQISEAYEVLSDPQKRAVYDQYGEEGLKGQVPPPSGGGGSTFFSSGEIPTSFRFNPRSADDIFAEFFGFEGDMGRGGGTRSRFPFGDDVFRSFGDGGGGVHMSQGASRKAAPIENKLPCSLEEIYKGTTKKMKISREIVDASGYNKTAQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFTREGNDLITTQKISLVEALTGCTVNLTTLDGRNLTVPINNVVHPEYEEVVAREGMPLPKDPTKKGNLRIKFSIKFPARLTADQKAGVKKLLAA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr472g00002 358 SUPERFAMILY Chaperone J-domain 24 118 IPR036869 -
Mupr472g00002 358 Gene3D DnaJ domain 24 147 IPR036869 -
Mupr472g00002 358 SUPERFAMILY HSP40/DnaJ peptide-binding domain 176 273 IPR008971 GO:0006457|GO:0051082
Mupr472g00002 358 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 22 356 - -
Mupr472g00002 358 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Mupr472g00002 358 FunFam DnaJ subfamily B member 13 24 145 - -
Mupr472g00002 358 CDD DnaJ_C 179 344 - -
Mupr472g00002 358 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 350 IPR008971 GO:0006457|GO:0051082
Mupr472g00002 358 Pfam DnaJ C terminal domain 181 341 IPR002939 -
Mupr472g00002 358 FunFam Dnaj homolog subfamily b member 177 260 - -
Mupr472g00002 358 PRINTS DnaJ domain signature 45 60 IPR001623 -
Mupr472g00002 358 PRINTS DnaJ domain signature 63 83 IPR001623 -
Mupr472g00002 358 PRINTS DnaJ domain signature 83 102 IPR001623 -
Mupr472g00002 358 PRINTS DnaJ domain signature 27 45 IPR001623 -
Mupr472g00002 358 SMART dnaj_3 24 83 IPR001623 -
Mupr472g00002 358 FunFam DnaJ subfamily B member 13 262 342 - -
Mupr472g00002 358 ProSiteProfiles dnaJ domain profile. 25 91 IPR001623 -
Mupr472g00002 358 Gene3D - 262 341 - -
Mupr472g00002 358 Pfam DnaJ domain 25 88 IPR001623 -
Mupr472g00002 358 Gene3D - 180 260 - -
Mupr472g00002 358 CDD DnaJ 25 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr472g00002 Mupr-Chr472 8362 10828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr472g00002 26 90 C2H2 Transcription Factor Family AT1G74250 37.681 1.50e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr472g00002 K09510 - gmx:100778672 534.258