Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr471g00010 ATGAGAGGGAAACAGCAGCGTGCAGCGGAAGACTCGTCTTTCACTCCAAAGCCTTCCTCTCCTCATCACAACCAGAATTTGGGCTCGCCAAACCACCGCAGGCCCACACAGAGGAATCGAGGCCCACAATTGCAATTCCATGTCGTCAACAAGCCCGAACCGGTTTCTTCTTCCAATTCTCACTCTGCGGAGGATGTAAATGTTGACGTCACTGTCACGCCCCAAAATCGCGATCATGAGGACAGTGGCGCCTCTGAGCTCAACACCGTTGACGACGCAGATCGCGTGGCTAGTTCAAGCATGGCCGGGGAAGGAGACGACGATGATAATAATATTCAGGCTAGGCTTGATAAGTTGCTCAGTAAAATCGAGGAACCTGAATTGTCCGAGGAACAGAGCAGAATCAACGATCAATTGCAGCAAGATGAGATACTTGTGGTGGAGTCAATTTATGGAGAAAATGTTTTCAGCCTTGAGAGATGGAAAGGCCTGCGTTGTTTTCAGATACATATACACATTGATGTTTTAGGTGAAATTGCCATCACTGCTAAGATTAACTCTCTTAATAAACTTGAGACTGTAAGCAGCGATTCAGATGAGTTTTTATACACTTTCAAAGTCCATTATCTTCCACCGATTGTTTTGACATGTTTATTACCTAAGTCATACCCAAGCCACCAACCACCTATTTTTACACTCTCTGTTAAGTGGTTGGAACCTGTGAAGATTCTGAGCCTGTGCTCCAAGTTGGATTCTATATGGGCAGAACAACAGGGGCAGGAAGTAATTTATCCTTGGGTAGAATGGTTACATGGTTCTTCTCTTTCTCATCTCGGTTTTGATGAGGAAATCACACTTGGGCCTTATGGCATGAATTGTCTCCAGGATGAGCGTGTTGTTTCAGGAGCTGAATGCATTGATGTTGATATTCCTTTTTTACAAAGTTACAATGATCAGAGACACAATGAGAACTTCCTCAAAGAATTGCAAGGATGTAACATTTGCTTTAGTGAATATGCAGGTACTGAGTTTATTCGGTTACCATGTAAGCATTTTTTTTGCCTCAAATGCTTGCAGACCTTTGCCCAGATACATGTAAAGGAAGGCACTGTTAGTAATCTTCAATGTCCTGAAGCAAAATGTGCGGTTATGATTCCACCTGGCCTTTTAAAACACTTGCTGGATGACACAGATTATGAACGCTGGGAATCCATGATGTTGGAAAAAACACTTGCATCAATGTCTGATATTGTTTATTGTCCAAGATGTGAAACACCTTGTATAGAGGATGAAGACCAGCATGCTCAATGTCCGAAATGCTATTTTAGTTTTTGTACCCTTTGCAGGGAACGACGTCATGTTGGCGTAGCATGCATGACACTAGATATGAAGCTTCAGATTTTGCAGGACCGACAAAATTCATCTCAATTAAAGGGAGATCAAAAGCGTAGGGAACTTGAAAAGATCAATGAAATGCTAAGTATGAAAGAAATTCATCGGGATTCCAAGCTTTGCCCATCTTGTGACATGGCAATTTCTCGGACTGAAGGATGTAACAAAATGAAATGCGGTAATTGTGAACAATACTTCTGTTACCGCTGCAACAAAGCAATTGATGCATCAGATCCATATGGACATTTCAGGGATGGTTCATGTGAATTGTTCCCACGAGAAATGGTTGAGTCCTGGCAAGAGCGCATAAATAATCGCCAGGCGGTAGGACAATTACAGGCTACACTCTTTCCTCAACGAGGCTTGGTATGTCCTAATTGTCGTCAGTTTAATGCAAAGATTGGAAATAATAATCACTTGTTTTGCTGGGCATGCCAAAGCCATTACTGCTACTTATGCAAAGAGATTGTCAGGCGTGGCACTAAGCATTATGGACCAAAGGGCTGCAAACAGCACAGCGAGGGATAG 1920 0.4286 MRGKQQRAAEDSSFTPKPSSPHHNQNLGSPNHRRPTQRNRGPQLQFHVVNKPEPVSSSNSHSAEDVNVDVTVTPQNRDHEDSGASELNTVDDADRVASSSMAGEGDDDDNNIQARLDKLLSKIEEPELSEEQSRINDQLQQDEILVVESIYGENVFSLERWKGLRCFQIHIHIDVLGEIAITAKINSLNKLETVSSDSDEFLYTFKVHYLPPIVLTCLLPKSYPSHQPPIFTLSVKWLEPVKILSLCSKLDSIWAEQQGQEVIYPWVEWLHGSSLSHLGFDEEITLGPYGMNCLQDERVVSGAECIDVDIPFLQSYNDQRHNENFLKELQGCNICFSEYAGTEFIRLPCKHFFCLKCLQTFAQIHVKEGTVSNLQCPEAKCAVMIPPGLLKHLLDDTDYERWESMMLEKTLASMSDIVYCPRCETPCIEDEDQHAQCPKCYFSFCTLCRERRHVGVACMTLDMKLQILQDRQNSSQLKGDQKRRELEKINEMLSMKEIHRDSKLCPSCDMAISRTEGCNKMKCGNCEQYFCYRCNKAIDASDPYGHFRDGSCELFPREMVESWQERINNRQAVGQLQATLFPQRGLVCPNCRQFNAKIGNNNHLFCWACQSHYCYLCKEIVRRGTKHYGPKGCKQHSEG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr471g00010 639 MobiDBLite consensus disorder prediction 8 68 - -
Mupr471g00010 639 SUPERFAMILY UBC-like 137 271 IPR016135 -
Mupr471g00010 639 Pfam zinc-RING finger domain 332 377 IPR001841 -
Mupr471g00010 639 MobiDBLite consensus disorder prediction 73 92 - -
Mupr471g00010 639 ProSitePatterns Zinc finger RING-type signature. 349 358 IPR017907 -
Mupr471g00010 639 SMART ibrneu5 400 458 IPR002867 GO:0008270
Mupr471g00010 639 SMART ibrneu5 487 552 IPR002867 GO:0008270
Mupr471g00010 639 MobiDBLite consensus disorder prediction 1 68 - -
Mupr471g00010 639 FunFam RBR-type E3 ubiquitin transferase 473 582 - -
Mupr471g00010 639 SMART ring_2 588 617 IPR001841 -
Mupr471g00010 639 SMART ring_2 332 379 IPR001841 -
Mupr471g00010 639 SMART ring_2 420 508 IPR001841 -
Mupr471g00010 639 Gene3D Ubiquitin Conjugating Enzyme 129 278 IPR016135 -
Mupr471g00010 639 Pfam IBR domain, a half RING-finger domain 495 538 IPR002867 GO:0008270
Mupr471g00010 639 Pfam IBR domain, a half RING-finger domain 400 458 IPR002867 GO:0008270
Mupr471g00010 639 CDD Rcat_RBR_RNF14 490 555 IPR047548 GO:0008270
Mupr471g00010 639 CDD BRcat_RBR_RNF14 411 462 - -
Mupr471g00010 639 SMART RWD2001b 142 277 IPR006575 GO:0005515
Mupr471g00010 639 ProSiteProfiles Zinc finger RING-type profile. 332 380 IPR001841 -
Mupr471g00010 639 FunFam RBR-type E3 ubiquitin transferase 327 411 - -
Mupr471g00010 639 MobiDBLite consensus disorder prediction 74 88 - -
Mupr471g00010 639 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 328 415 IPR013083 -
Mupr471g00010 639 ProSiteProfiles TRIAD supradomain profile. 328 558 IPR044066 -
Mupr471g00010 639 ProSiteProfiles RWD domain profile. 142 277 IPR006575 GO:0005515
Mupr471g00010 639 Gene3D - 476 581 - -
Mupr471g00010 639 SUPERFAMILY RING/U-box 400 463 - -
Mupr471g00010 639 SUPERFAMILY RING/U-box 492 547 - -
Mupr471g00010 639 SUPERFAMILY RING/U-box 328 411 - -
Mupr471g00010 639 CDD RING-HC_ITT1-like 326 385 - -
Mupr471g00010 639 SUPERFAMILY RING/U-box 583 636 - -
Mupr471g00010 639 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 186 546 IPR031127 GO:0004842|GO:0016567
Mupr471g00010 639 Pfam RWD domain 138 271 IPR006575 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr471g00010 332 593 ARIADNE family AT2G31780 22.591 7.59e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr471g00010 K11971 - gmx:100500662 1099.35