Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4710g00008 AAAGATGTGATAGGACTTGCCCAAACGGGTTCTGGTAAGACTGGAGCATTTGCTCTTCCCATATTACATGCCCTCTTAGAAGCACCTCGCCCAAAAGATTTCTTTGCATGTGTATTGTCTCCCACAAGAGAACTTGCTATTCAAATTGCTGAGCAGTTTGAAGCTCTTGGTTCTGAAATTGGTGTCAAGTGTGCTGTGCTTGTTGGAGGAATTGACATGGTACAACAATCCATCAAGATAGCAAAACAACCTCATATTATTGTTGGGACTCCTGGACGAGTTTTAGATCACCTAAAAAACACCAAAGGATTTTCTCTTAGTAGATTAAAATACTTGGTCTTAGATGAGGCAGATAGGTTGTTGAATGAGGACTTTGAGGAATCACTTAGTGAGATTTTACAAATGATTCCTCGTGAGCGGAGGACATTTCTGTTTTCTGCTACGATGACCAAGAAGGTCCAGAAGCTCCAAAGGGTTTGTTTGAGGAATCCTGTGAAGATTGAAGCTGCATCTAAGTATTCCACCGTTGACACATTGAAGCAGCAGTATCGCTTCTTGCCTGCCAAACACAAGGATTGCTACCTTGTATACATTCTCACTGAAATGGCTGGAAGTACATCAATGGTGTTCACTCGTACTTGTGATGCAACTCGGCTTCTAGCTTTGATCCTTAGGAATCTTGGTCTAAAAGCCATCCCAATTAATGGTCATATGAGCCAGCCAAAGAGACTTGGAGCCTTGAATAAGTTCAAATCTGGGGACTGCAATGTTCTCCTTTGTACTGATGTAGCCAGTAGAGGACTGGATATTCCGGCGGTAGATATGGTGATTAACTATGACATTCCCACAAACTCCAAAGATTATATACATCGTGTGGGAAGAACTGCTCGTGCAGGGCGCTCTGGGGTTGCTATTTCCCTTGTAAATCAGTATGAGCTGGAGTGGTACATTCAAATAGAGAAGCTTATAGGCAAGAAGCTACCAGAGTATCCTGCACAAGAGGAGGAAGTTCTGCTTTTGGAAGAGCGTGTTAGTGAGGCCAAAAGATTAGCCGTCATGAAAATGAAGGAGACTGATGGAGGGAAGAAGAAACGCAGGGGCGAAGAAGATTTTGACGGGGAGGATATCGACAAGTACTTGGGTCACAAGAATGGAAAATCATCCAAGAAGTTTAAAAGAAGA 1182 0.4289 KDVIGLAQTGSGKTGAFALPILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSLSRLKYLVLDEADRLLNEDFEESLSEILQMIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNVLLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSEAKRLAVMKMKETDGGKKKRRGEEDFDGEDIDKYLGHKNGKSSKKFKRR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4710g00008 394 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 167 IPR014001 -
Mupr4710g00008 394 Gene3D - 173 345 IPR027417 -
Mupr4710g00008 394 Pfam Helicase conserved C-terminal domain 194 299 IPR001650 -
Mupr4710g00008 394 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 113 121 IPR000629 -
Mupr4710g00008 394 Gene3D - 1 172 IPR027417 -
Mupr4710g00008 394 SMART ultradead3 1 182 IPR014001 -
Mupr4710g00008 394 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 194 338 IPR001650 -
Mupr4710g00008 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 320 IPR027417 -
Mupr4710g00008 394 SMART helicmild6 218 299 IPR001650 -
Mupr4710g00008 394 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 349 - -
Mupr4710g00008 394 Pfam DEAD/DEAH box helicase 1 156 IPR011545 GO:0003676|GO:0005524
Mupr4710g00008 394 MobiDBLite consensus disorder prediction 355 384 - -
Mupr4710g00008 394 CDD SF2_C_DEAD 179 308 - -
Mupr4710g00008 394 MobiDBLite consensus disorder prediction 355 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4710g00008 Mupr-Chr4710 40551 47476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4710g00008 1 331 Eukaryotic Initiation Factors Gene Family AT3G19760 31.940 2.69e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4710g00008 K14777 - gmx:100775796 735.717