Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4710g00006 ATGGAAGCAACAGTAGCAGCAGCAGTAACCTCTTCTCAGAGAAAGCCGAAGAGGAAGCGAGCCACGGCAAGAAGCGATCCAGAACTCGACCGTCTCAACTCGCTTCCGTGGAACTCCGCTCTTCCTCAAAACGACGACGATGACATTTTCTCCATGTTCATTGGCTCCAATGAACTCGAAGGAGGTTTTCTTTCGCTCGAGGAGATTGATGAGGCTGAGTATGGTTTGAATATTCCTGAACCTGAAGTTGACGAGAGGAAGAAGAAGAAGAAGTGTAAACAGAACGAAAATGTGAAGAGACAGCAGCAAGATGGAGTTGATGCTGCATGTAGTGACCTGGTCGAAGCAGAGTTGGATGAGAGCCTGAAGACTAAAGAGAAGAAAAAGAAGAAAAAGAAGAAGAAAAATAAGGATGCTAGAGAAAACCAGAAAGTTAAGCAGTCAGATGCTGGTTTAGATACTAATGTGAAGGATGATACTGGGGAAGAGGACATTGATGAAACTGAATTTTATGCATGGAATGAGTTGAGGCTTCATCCTCTCCTAATGAAAGCGATATGCAAGCTTGGCTTCAAGGAACCAACACCGATACAGAAGGCTTGTATTCCAGTTGCTGCTCATCAAGGGAAGGATGTTGTTGGGGCTGCAGAGACAGGATCTGGTAAAACACTTGCGTTTGGTTTGCCCATTTTGCAACGCCTTTTGGAGGAGAGAGACAAGGCTGCAAATATGGTTGAAGAGCCTGAAAACTATGCTCCTAGAGGCCATTTGAGGGCTCTTATTATTACTCCGACTAGAGAACTTGCACTTCAGGTTGCTGATCATCTGAAAGCAGTAGCCAAGTATATTAATGTTAGGGTGACCCCTATAGTTGGGGGGATTTTAGCAGAAAAGCAGGAGAGACTTTTAAAAGCAAAGCCTGAGATTGTTGTCGCGACTCCAGGAAGGTTATGGGAACTTATGTCAGCTGGAGAAAAACATCTAGTGGAGTTACATTCGCTGTCTTTCTTTGTGCTTGACGAGGCTGATCGGATGGTACAAAATGGTCATTTTAAGGAGTTGCAGTCAATAATTGATATGCTTCCCATGTCCAACATCTCTACTGAAGATAATTCTCAACATGTACAAAGTTGTGTTACAGTTTCTAGTTACCAAAGAAAGAAAAGGCAAACTCTTGTTTTTTCAGCAACTGTTGCATTGTCTGCTGATTTTCGCAAGAAGCTAAAACGTGGATCAAATCAACAAAAGCAATCATTGACAGATGGATTAAATTCTATTGAAACACTTTCTGAGCGTGCAGGAATGAAATCCAATGCTGCAATTATTGATCTTACTAATCAGTCTATATTAGCAGCTAAGCTTGAGGAGTCATTTATTGAATGCAGAGAAGAAGATAAAGATGCCCATTTGTATTATATTTTGACTGTCCATGGACAAGGCCGCACAATAGTTTTCTGTACGTCAATTGCAGCTTTACGCCATATTTCTTCCATACTGCGCATTCTTGGCATCAATGTTTGGACTCTCCATGCCCAAATGCAACAGCGTGCACGTTTGAAGGCCATGGATCGCTTTCGTGAAAATCAAAATGGCATACTTGTAGCTACAGATGTTGCGGCAAGAGGTCTTGATATTCCTGGTGTTAGAACTGTTGTCCACTATCAGCTTCCACATTCAGCAGAGGTCTATGTTCATAGGAGTGGAAGAACAGCCAGAGCTTCTGCCGAAGGTTGTAGTATTGCTTTAATATCACCAAGAGATACATCAAAGTTTGCTTCATTGTGCAAGTCATTTTCTAAGGATACCTTTCAGCGGTTTCCTTTAGAGAACTCTTACATGCCAGAGGTCCTTAAACGATTGTCTCTTGCACGTCAAATAGACAAGATAACAAGGAAGGATTCCCAGGAAAAAGCTGAGAAAAACTGGTTTGATCGGAATGCTAGCTCAGTGGAATTAGTTACAGAAAATTATGACAGTGAAGAGGAACAAGTGAACAAACATAAGCAAATGAAGGCCAGCTCTAGACAATTGAAGAAATTGCAGGAGGAGCTCAATATGCTGATTTCACGTCCATTACAATCTAAAACATTTTCGCATCGGTATTTAGCAGGGGCTGGTGTCACACCCCTCATGCAGGAGCAATTGCAGCAATTAGCAAAGCAAAAACTAAGTGATCACCAGGGTTCGGGACTAGGCAAAAGGGGAAAATTGGTTGTGATTGGTCAAGATTGTGTGGAAGCACTTCAGGCACTTCGAAGTGCTGGTGAAGAGGTGCGAATGGACGTCAAGGATTTGGCAGGAAAACAGAGAAATGTGGAGAATCTAAAAAGAAAGCGAAAAGATGAGAAGAAACGCTTGCGTGATCAGCATAGAAAGCAGAAGAGAAAGCTAAAGCACGGGGATGAATAG 2409 0.4247 MEATVAAAVTSSQRKPKRKRATARSDPELDRLNSLPWNSALPQNDDDDIFSMFIGSNELEGGFLSLEEIDEAEYGLNIPEPEVDERKKKKKCKQNENVKRQQQDGVDAACSDLVEAELDESLKTKEKKKKKKKKKNKDARENQKVKQSDAGLDTNVKDDTGEEDIDETEFYAWNELRLHPLLMKAICKLGFKEPTPIQKACIPVAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEERDKAANMVEEPENYAPRGHLRALIITPTRELALQVADHLKAVAKYINVRVTPIVGGILAEKQERLLKAKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNISTEDNSQHVQSCVTVSSYQRKKRQTLVFSATVALSADFRKKLKRGSNQQKQSLTDGLNSIETLSERAGMKSNAAIIDLTNQSILAAKLEESFIECREEDKDAHLYYILTVHGQGRTIVFCTSIAALRHISSILRILGINVWTLHAQMQQRARLKAMDRFRENQNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPRDTSKFASLCKSFSKDTFQRFPLENSYMPEVLKRLSLARQIDKITRKDSQEKAEKNWFDRNASSVELVTENYDSEEEQVNKHKQMKASSRQLKKLQEELNMLISRPLQSKTFSHRYLAGAGVTPLMQEQLQQLAKQKLSDHQGSGLGKRGKLVVIGQDCVEALQALRSAGEEVRMDVKDLAGKQRNVENLKRKRKDEKKRLRDQHRKQKRKLKHGDE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4710g00006 802 Gene3D - 119 415 IPR027417 -
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 124 161 - -
Mupr4710g00006 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 362 IPR027417 -
Mupr4710g00006 802 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 453 614 IPR001650 -
Mupr4710g00006 802 CDD DEADc_DDX24 182 443 - -
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 140 158 - -
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 79 100 - -
Mupr4710g00006 802 SMART ultradead3 190 418 IPR014001 -
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 1 43 - -
Mupr4710g00006 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 589 IPR027417 -
Mupr4710g00006 802 Coils Coil 765 796 - -
Mupr4710g00006 802 Pfam Helicase conserved C-terminal domain 465 573 IPR001650 -
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 780 794 - -
Mupr4710g00006 802 SMART helicmild6 493 574 IPR001650 -
Mupr4710g00006 802 PANTHER RNA HELICASE 129 712 - -
Mupr4710g00006 802 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 171 199 IPR014014 GO:0003724
Mupr4710g00006 802 Gene3D - 444 693 IPR027417 -
Mupr4710g00006 802 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 338 346 IPR000629 -
Mupr4710g00006 802 Pfam DEAD/DEAH box helicase 195 399 IPR011545 GO:0003676|GO:0005524
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 769 802 - -
Mupr4710g00006 802 Coils Coil 115 142 - -
Mupr4710g00006 802 Coils Coil 650 690 - -
Mupr4710g00006 802 CDD SF2_C_DEAD 454 583 - -
Mupr4710g00006 802 MobiDBLite consensus disorder prediction 74 106 - -
Mupr4710g00006 802 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 203 416 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4710g00006 Mupr-Chr4710 15704 31010 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4710g00006 172 614 Eukaryotic Initiation Factors Gene Family AT5G11200 28.419 7.94e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4710g00006 K14805 - gmx:100806018 1378.62