Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr470g00004 ATGGCAAATTTCACCTCTTCGTCTCCCTTACCTCCATCTATGTCACACATTTCATCTCCCTCATCTTCTGCAGCTTTTGACGACAGTTCCGAGGACGCCTGCAGCATATGTCTTGAGCCCTTCGGCACCGATGACCCCGCCACCATTACCAGTTGCAAACATGAATATCATCTGCATTGTATTCTTGAATGGTCACAGAGAAGCAAAGAATGCCCAATATGTTGGCAATTACTTATCTTGAAAGACCCTGCCAGCCAAGAGCTTCTAGCTGCAGTGGAGGCTGAAAAATGCTTAACTTCAAGAACTGTATATTCACATGCATTCACTAATTCCCGTATTCCCCTTGAACGGCTTAACAATGACCATAGGCAAATAATTCTGTTGCAGGATGATTCTTGTTCAGATGACTCTGATTTTGATGAACAACTTATGCAGCACCTAGTTGCTGCTGCAAGTAGAGCTCGTTACATCTGCAGACGGGAAAGGCAGAGATCTTCTGGAGCTGGTCCTTCAGAGGTTCTTGTTTTTAACTCTTCTATGCATGCCTTGGGGATGCAACCAACACTTACAACTCCACCATCTGGGGGCAGTTCACCAACTTCTGGTGTACCTTTTTCTGATGCTCACAATCAACCTCCAACACCTGCTTTCTCCTCTGTTGGCATGGTTTCAACAAATACTTCTTCTGAGAGTGACATACCTTCCAAACCCAGAGTTATCTATAGCCAGCCATCACCTGAGAGTGCGAGGAGACTGAACACTTCTGAGATGTTCTCCTTCCCCGAGTCTATCAAATCGAAATTTTCTGCTGCTTCAGCCAGATGTAAGGAATCAATTTCAAAAAATACCCGTGGTCTTAAAGAGAAGTTGATTGCACGTAATGCCTCAGTGAAAGAGCTGAGTAAAGGAGTTCAGCGTGAGATGAATGCAGGCATTGCTGGTGTTGCACGAATGATTGAACGCCTTGATCTTACCTCAAAACGGTCCTCATCTCCTCTCATCCCTGTAAAAGGGAAGTCTGTCCAAGAGAATGAAGAGAGTGGAGTTTTGGTTGGGGATGTTACTTCAAATGCTTCCTCACTCGATTCTAGCTTGGTTGCTGTTGGAGTGGAAATTCCTCCTTCATGTGTTCAGGGTGGACATGATGCTGTGAGGACATAG 1161 0.4513 MANFTSSSPLPPSMSHISSPSSSAAFDDSSEDACSICLEPFGTDDPATITSCKHEYHLHCILEWSQRSKECPICWQLLILKDPASQELLAAVEAEKCLTSRTVYSHAFTNSRIPLERLNNDHRQIILLQDDSCSDDSDFDEQLMQHLVAAASRARYICRRERQRSSGAGPSEVLVFNSSMHALGMQPTLTTPPSGGSSPTSGVPFSDAHNQPPTPAFSSVGMVSTNTSSESDIPSKPRVIYSQPSPESARRLNTSEMFSFPESIKSKFSAASARCKESISKNTRGLKEKLIARNASVKELSKGVQREMNAGIAGVARMIERLDLTSKRSSSPLIPVKGKSVQENEESGVLVGDVTSNASSLDSSLVAVGVEIPPSCVQGGHDAVRT 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr470g00004 386 SUPERFAMILY RING/U-box 27 81 - -
Mupr470g00004 386 FunFam E3 ubiquitin-protein ligase RHF1A 19 86 - -
Mupr470g00004 386 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 15 83 - -
Mupr470g00004 386 SMART ring_2 34 74 IPR001841 -
Mupr470g00004 386 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
Mupr470g00004 386 Pfam Ring finger domain 33 74 IPR001841 -
Mupr470g00004 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 88 IPR013083 -
Mupr470g00004 386 MobiDBLite consensus disorder prediction 184 250 - -
Mupr470g00004 386 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr470g00004 Mupr-Chr470 30797 33517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr470g00004 3 82 C3H Transcription Factor Family AT4G00335 38.750 5.73e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr470g00004 K19043 - gmx:100785684 567.77