Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4677g00001 ATGGAGAAGATGGGAAGAAAGGCCAATTGTGACAATCAAGATGCTATGAATAGAGGTCCTTGGTCTGCTGAAGAAGACAGAATTCTTATGGACTACGTTCAAGTCCATGGAGAAGGAAAATGGAGAGAGCTTTCCAAAAGAGCTGGCTTGAAAAGATGTGGGAAAAGTTGCAGACTTCGATGGTTAAATTATCTCAAGCCAGATATCAAGAGAGGAAACATTTCTTCAGATGAAGAAGATCTCATTATTAGACTACATAAGTTATTAGGGAATAGATGGTCTCTTATTGCGGGACGCTTACCAGGGCGAACAGACAATGAAATTAAAAACTATTGGAATACTTATTTGAGAAAGAAGGTAGAGCAGAAGTACAAGCATAACAAAATTCCTGATCATGACAATAATATTCCTATCAAATTAAGAATTGAATCTCCAGGTTGCTCAAACAATTCCTTGGGTACTATTCTTGATCCTACAAAATCCCCTCATCCAATGATGATTAAACCAAAATCAATGAGGTGTACCAAGGTTATGATGCCAACTCGTGATTCAATCAACACGATGGATTTAATTGCAACGACTTGGGACAATCAAAACCCTTCTGTATCCATGCCACAAGATGACCATCATCATTGCTTAGGTGTCCTCCAAGACTTTGACATCAATGACTTATTAATGTCATATGAGGATGATTGTCATTTTAATGGATATGCTTGTGTTGAAATACCCGAACATATTTTTGAAGATGAAACTTGGAGGCTTAATGATTCAATGGACGAAGAAGCATGGTATGAGAATTGGAAAATTGACCCTTATTTTCCACAAGAAGAAGATATGGGCTTTTCTTCATTTTAA 855 0.3708 MEKMGRKANCDNQDAMNRGPWSAEEDRILMDYVQVHGEGKWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEQKYKHNKIPDHDNNIPIKLRIESPGCSNNSLGTILDPTKSPHPMMIKPKSMRCTKVMMPTRDSINTMDLIATTWDNQNPSVSMPQDDHHHCLGVLQDFDINDLLMSYEDDCHFNGYACVEIPEHIFEDETWRLNDSMDEEAWYENWKIDPYFPQEEDMGFSSF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4677g00001 284 FunFam Transcription factor TT2 74 141 - -
Mupr4677g00001 284 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Mupr4677g00001 284 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Mupr4677g00001 284 Gene3D - 18 70 - -
Mupr4677g00001 284 CDD SANT 20 65 IPR001005 -
Mupr4677g00001 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Mupr4677g00001 284 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Mupr4677g00001 284 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Mupr4677g00001 284 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Mupr4677g00001 284 FunFam MYB-related transcription factor 17 70 - -
Mupr4677g00001 284 SMART sant 17 67 IPR001005 -
Mupr4677g00001 284 SMART sant 70 118 IPR001005 -
Mupr4677g00001 284 Gene3D - 75 139 - -
Mupr4677g00001 284 CDD SANT 75 116 IPR001005 -
Mupr4677g00001 284 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 149 - -
Mupr4677g00001 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4677g00001 Mupr-Chr4677 8946 10433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4677g00001 10 120 MYB Transcription Factor Family AT3G13540 72.072 4.93e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr4677g00001 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4677g00001 K09422 - gmx:100794570 496.893