Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4676g00007 ATGAACATTCTCGGAGAATCATTGGACGAGTCCAGCAATGGGTGCTACTCTTGTTCGTCGCCGAACACTTCTCACTCGGACGAGGAACTGCACACGTTAGCATCGGCGCAGCCGAAGAAGCGTGCGGGGCGTCGAATCTTCAAGGAGACCAGGCACCCCGTGTACCGAGGAGTGCGACGGAGGAACAACAACAAGTGGGTCTGTGAGGTGCGTGTTCCCAACGACAAGTCCACCAGGATTTGGCTCGGAACGTACCCGACGCCTGAGATGGCCGCACGTGCGCACGACGTCGCCGCGCTTGCGCTTCGTGGCAAGTCGGCTTGCCTCAACTTCGCCGACTCTGCGTGGCGGTTGCCTCTGCCTGCGTCCACCAATGCAAAGGAGATACGGCGAATGGCGGCGGAGGCTGCTGCGGCATTTGCGGCGGAGGACAGCTGCGGCGAGCAGCGGAATGTGAATGCCGTAATTGATTGCGAAGTTAGCAGCAGTGACGTCAGCGTTGAGGAAGATTCCAATAACAGCAAAGCTTTGCGGGGGTTTTGTTATCTGGATGAAATTACAATGCCAGATTCATCGGGTTATGAAGACAATGACATGCATGAGTGGCTTCAGAGTATGGCGAATGAGCCTTTGCGATCCCCTACTTTTGTAACGTATGTTAGGGAGTGGAACTTTGTGGAGGACGATGCTGAGGAACGGAGTACCAAGTGTACCGAGACCCAGACGATAAGGATCTAG 738 0.5542 MNILGESLDESSNGCYSCSSPNTSHSDEELHTLASAQPKKRAGRRIFKETRHPVYRGVRRRNNNKWVCEVRVPNDKSTRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLPLPASTNAKEIRRMAAEAAAAFAAEDSCGEQRNVNAVIDCEVSSSDVSVEEDSNNSKALRGFCYLDEITMPDSSGYEDNDMHEWLQSMANEPLRSPTFVTYVREWNFVEDDAEERSTKCTETQTIRI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4676g00007 245 Pfam AP2 domain 53 104 IPR001471 GO:0003700|GO:0006355
Mupr4676g00007 245 FunFam Ethylene-responsive transcription factor 2 53 113 - -
Mupr4676g00007 245 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Mupr4676g00007 245 MobiDBLite consensus disorder prediction 1 29 - -
Mupr4676g00007 245 SUPERFAMILY DNA-binding domain 54 114 IPR016177 GO:0003677
Mupr4676g00007 245 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Mupr4676g00007 245 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Mupr4676g00007 245 ProSiteProfiles AP2/ERF domain profile. 54 112 IPR001471 GO:0003700|GO:0006355
Mupr4676g00007 245 SMART rav1_2 54 118 IPR001471 GO:0003700|GO:0006355
Mupr4676g00007 245 CDD AP2 55 114 IPR001471 GO:0003700|GO:0006355
Mupr4676g00007 245 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 231 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4676g00007 Mupr-Chr4676 29954 30800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4676g00007 32 140 AP2-EREBP Transcription Factor Family AT1G63030 74.312 8.29e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr4676g00007 AP2 7.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4676g00007 - - pvu:PHAVU_003G212800g 353.984