Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4676g00001 ATGGCATCATCATCCAAGAGGCACCCAGTGTACCACGGAATCCGCTGTCGTGGAGGAAAATGGGTTACTGAAATCCGTGAGCCGCGTAAGACAAACCGCATATGGCTGGGGACATTCCTCACGGCGGAGATGGCAGCTGCCGCCTACGACGTGGCGGCGTTGGCCCTCAAAGGCGGTGAAGCGGTTCTCAACTTCCCCGACTCGGTTGGAAAGTACCCAGTACCAGCGTCCAAATCCCCTGCGGACATCCGCACCGCTGCCATTGCTGCAGCCGAACTCATCAAGTCCGAAGCCAACGTTAATGCATCAACAACTAATGCAGCACTTGAGTCTGATAACACTGATGCTGCTGTTTATGATGAAAATGCTTTTCCTCAGTTTCAAACTGAGTTTCTGGACGAGGAAGCCATTTTCTCCATGCCCAGTTTGCTGGTCGACATGGCAGGTGGAATGCTGCTATCCCCTCCCAGAATGAGCCCACCCTCCGATAACTGGCCCGAAACTTCTGCCGGAGAAAATTTGTGGAACTTTTGA 534 0.5318 MASSSKRHPVYHGIRCRGGKWVTEIREPRKTNRIWLGTFLTAEMAAAAYDVAALALKGGEAVLNFPDSVGKYPVPASKSPADIRTAAIAAAELIKSEANVNASTTNAALESDNTDAAVYDENAFPQFQTEFLDEEAIFSMPSLLVDMAGGMLLSPPRMSPPSDNWPETSAGENLWNF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4676g00001 177 ProSiteProfiles AP2/ERF domain profile. 10 66 IPR001471 GO:0003700|GO:0006355
Mupr4676g00001 177 MobiDBLite consensus disorder prediction 158 177 - -
Mupr4676g00001 177 SMART rav1_2 10 72 IPR001471 GO:0003700|GO:0006355
Mupr4676g00001 177 Gene3D AP2/ERF domain 10 67 IPR036955 GO:0003700|GO:0006355
Mupr4676g00001 177 CDD AP2 11 68 IPR001471 GO:0003700|GO:0006355
Mupr4676g00001 177 Pfam AP2 domain 9 58 IPR001471 GO:0003700|GO:0006355
Mupr4676g00001 177 MobiDBLite consensus disorder prediction 163 177 - -
Mupr4676g00001 177 SUPERFAMILY DNA-binding domain 10 68 IPR016177 GO:0003677
Mupr4676g00001 177 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 164 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4676g00001 Mupr-Chr4676 2270 2803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4676g00001 5 177 AP2-EREBP Transcription Factor Family AT5G52020 50.000 1.54e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr4676g00001 AP2 1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4676g00001 - - vra:106768065 259.225