Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr466g00002 ATGGCTGCGACCCTTCAACATTGTAGCTTCTCTTTGGTTACGTTTATATGGATGTTCATAATCATCGGAAAGCCAGTAATAGTAGAGTGCACATTTCAGCCTAGTCAATGGACTATTGCGCATGCCACATTTTATGGCGACGAGACTGCTTCTGCCACCATGGGAGGAGCGTGTGGGTACGGAAATTTGATCCAGAACGGTTACGGGACAGACACAGCGGCATTGAGCTCGACATTGTTCAATAACGGGTATGCATGCGGGACTTGTTATCAGATACAGTGTGTGCAATCGAGTGCATGCTACTCCACTGTTCCTTACACTACAGTCACTGCCACCAATCTTTGCCCTCCTAATTGGGCCGAGGCCTCTGATAACGGAGGCTGGTGCAACCCACCACGCGCACATTTTGACATGTCCAAGCCCGCCTTCATGAAAATTGCACAGTGGCAAGCTGGAATCATTCCTGTAATGTACCGCAGAGTACCTTGCGTAAGGAGTGAAGGGCTAAGATTCTCTTTTCAAGGAAATGGGTATTGGTTATTGGTGTACGTGATGAATGTGGGAGGTGGAGGAGATATTGCTAACATGTGGGTGAAAGGAAGTGGAACAGGCTGGATTAGCATGAGCCATAATTGGGGGGCTTCTTATCAAGCATTTGCAGCATTGGGTGGTCAAGCTCTTTCCTTTAAGGTTACTTCCTACACAACCAAAGAGACTATAATAGCATGGAATGTTGCTCCTGCCAACTGGGGCGTAGGACTAACTTATTCCTCCACTGTCAATTTCAATTGA 792 0.471 MAATLQHCSFSLVTFIWMFIIIGKPVIVECTFQPSQWTIAHATFYGDETASATMGGACGYGNLIQNGYGTDTAALSSTLFNNGYACGTCYQIQCVQSSACYSTVPYTTVTATNLCPPNWAEASDNGGWCNPPRAHFDMSKPAFMKIAQWQAGIIPVMYRRVPCVRSEGLRFSFQGNGYWLLVYVMNVGGGGDIANMWVKGSGTGWISMSHNWGASYQAFAALGGQALSFKVTSYTTKETIIAWNVAPANWGVGLTYSSTVNFN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr466g00002 263 SMART dpbb_1 72 158 IPR007112 -
Mupr466g00002 263 SUPERFAMILY Barwin-like endoglucanases 36 186 IPR036908 -
Mupr466g00002 263 Pfam Lytic transglycolase 72 158 IPR009009 -
Mupr466g00002 263 PRINTS Expansin/Lol pI family signature 36 51 IPR007118 GO:0005576
Mupr466g00002 263 PRINTS Expansin/Lol pI family signature 54 72 IPR007118 GO:0005576
Mupr466g00002 263 PRINTS Expansin/Lol pI family signature 76 94 IPR007118 GO:0005576
Mupr466g00002 263 PRINTS Expansin/Lol pI family signature 244 258 IPR007118 GO:0005576
Mupr466g00002 263 PRINTS Expansin/Lol pI family signature 151 167 IPR007118 GO:0005576
Mupr466g00002 263 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Mupr466g00002 263 Pfam Expansin C-terminal domain 170 247 IPR007117 -
Mupr466g00002 263 PRINTS Expansin signature 179 200 IPR002963 GO:0009664
Mupr466g00002 263 PRINTS Expansin signature 143 156 IPR002963 GO:0009664
Mupr466g00002 263 PRINTS Expansin signature 67 81 IPR002963 GO:0009664
Mupr466g00002 263 PRINTS Expansin signature 126 143 IPR002963 GO:0009664
Mupr466g00002 263 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Mupr466g00002 263 PRINTS Expansin signature 167 179 IPR002963 GO:0009664
Mupr466g00002 263 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
Mupr466g00002 263 CDD DPBB_EXPA_N 36 163 - -
Mupr466g00002 263 PANTHER EXPANSIN-A15 15 258 IPR002963 GO:0009664
Mupr466g00002 263 Gene3D - 169 263 IPR036749 -
Mupr466g00002 263 Gene3D - 24 163 IPR036908 -
Mupr466g00002 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 258 IPR007117 -
Mupr466g00002 263 SUPERFAMILY PHL pollen allergen 168 258 IPR036749 -
Mupr466g00002 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 55 168 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr466g00002 Mupr-Chr466 17800 19602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr466g00002 10 263 Expansin Gene Family AT1G12560 68.110 5.16e-123 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr466g00002 - - gmx:100781459 514.998