Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr464g00002 ATGTCATGCTGCAGCATCGATGTTGCCCCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCCACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAACCTGTTTGACATTGTGACCGTTCGTTGTGGGCACTGCACCAATCTATGGTCCGTGGACATGGCCGCAGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGCATCTGGATACTCCAATCCGGAGTATAGAATTGACACAGGCTCCACTTCTAAATGCAACAAGATACAAATGCGTGCACCCACCACTCACGTAACTGAGGAAAGGGTTGTGAACCGGCCTCCTGAGAAGAAGCAGCGTGTACCTTCTGCTTATAATCAGTTCATCAAGGAAGAGATTCAAAGGATCAAGGCCAATAATCCTGATATCAGTCACAGGGAAGCTTTCAGTACAGCTGCGAAGAACGTAATGGGCACATTTCCCTCATATTCACTTTGGGCTGATGTTAGAAAGCAAGAATCAAGCTTAGATGGAGAA 513 0.4737 MSCCSIDVAPEQLCYIPCNFCHIVLAVSVPCSNLFDIVTVRCGHCTNLWSVDMAAAFQSLSWQDVQASGYSNPEYRIDTGSTSKCNKIQMRAPTTHVTEERVVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNVMGTFPSYSLWADVRKQESSLDGE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr464g00002 171 Gene3D High mobility group box domain 96 165 IPR036910 -
Mupr464g00002 171 CDD HMG-box_SF 112 146 - -
Mupr464g00002 171 SUPERFAMILY HMG-box 102 144 IPR036910 -
Mupr464g00002 171 Pfam YABBY protein 9 148 IPR006780 GO:0007275
Mupr464g00002 171 PANTHER PROTEIN YABBY 6-RELATED 1 158 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr464g00002 Mupr-Chr464 28282 32055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr464g00002 8 164 C2C2-YABBY Transcription Factor Family AT2G26580 69.375 1.79e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mupr464g00002 YABBY 1.8e-58 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr464g00002 K25796 - gmx:100804731 284.648