Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4642g00004 ATGGAATCCACCTCCGCCGTTTCGACGCAGCAGCACCAGCGAGTGAACGGTTACCTTGTCTACACTCGCCGAAAGAGGATCCTCCATTCCGATAATGACCCCGCCAAGAGGCTCAAAACCGGTCACAATGCTGAAATTAAAGTGGAGAGTGAGAGCCAAGTGCCTCACGACGTCGTTTTCGGGGCCTTGAAGGTCGAGTCCGAAGACTCTGTTTCTGCCAATGCTGAGGAATTAACCAAGGTGGAGTTGAAGACGTCGAAGAAGATCATCGTCGTTAACAAGAAACCCGTCACCGTCAAGGAGCTTTTCCATACTGGCTTGCTCGATGGGGTTCCAGTTGTTTACATCGGTTGCAAAAAGGATTCAACTTCGGGATTGCGGGGTGTAATTACAGGTGGGGGGATCTTGTGCTCATGCCGTCTGTGCAATGGACGCAGGGTTATTCCACCTTCCCAATTCGAGATTCATGCATGCAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTGCTTGAACTAATGAGAGCATGCAGGGCAGCTCCGCTACATACTTTGGAGGCAACCATTCAAAATTTTGTTAGTTCTCCGCCAGAGGAGAAATATTTTACTTGCAAAAATTGCAGAGGGTGTTTCCCTTCTTCCAATGCGGAAAGAGTGGGGCTTTTATGCCTATCTTGCGTGGAATCAAGGAAATCTGAAGACAGTTCTATTCATGCTGTTGGCAAAAGAGTCAGGTCCCCTCGGCCAGTATTATTCTCCCGTTCATGTTCATGTTGTACTTCTGAACTGTGTATCACTCCACAAACTAAGAGACACTGGAAGACAAGAACAAAGTCACCAAAACTGTCAGTAAAATTGAAGACAGCTCCAATTACTTCCAAGTGTTTATCTCCACAAAATAAAAGTCAGTGGAGGATCTCTAAAAGGCATCAACGAATACATAAATTAATTTTTGAAGAGGATGGATTGCCTAATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAATTGCTTGAGGGTATCAAAACACGCTCCGGAATTGTCTGTCGATGCTGCAACACCGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCGTACATTTACACATCGAATGGGGTGTCACTCCATGAGTTAGCAATATTTCTCTCAAAAGATCACAAATGCACGACAAAGCAGAATGATTATGTATGTGTTGTTTGTTGGGATGGTGGAAACCTGTTGCTTTGTGATGGATGTCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCTCGGGGTGAGTGGTACTGTCAAATATGCCAACACATGTTCCTCAGAGACAGGCCCGTGTTATACAATAATGCTGATGCTGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCTATTGAGCAGATTGCCAAGAGATGCATTCGCATAGTAAAAGACATAGGAGCTGAGATTGGTGGATGTGTTTTATGCAGGAGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGCACAATTATAATCTGTGATCAGTGTGAAAAGGAATATCATGTTGGCTGCTTGAGGGATCATAAGATGGCATATTTGAAGGAGTTGCCAGAAGGGGATTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTACTTTGGAGAATCTCCTGGTTAGCGTGGCTGAGAGACTCCCTGAACCTCTTTTGGATGTTATAAAGAAGAAGCAAGTGGAAAGATGTTTAGAACCCCTTAATGGGATTGATGTAAGATGGAAACTTCTTAATGGAAAAATTGCGTCTCCTGAAACTAGGCCATTGCTTTTGGAGGCAGTATCTATGTTTCATGAATGTTTTGATCCTATAGTTGATCCAGCTGCTGCACGTGACCTTATTCCTGCCATGGTTTATGGTTCATCTGTGGTATCTGCTGGCATGCTTCGAATATTTGGTAGAGATATTGCTGAACTTCCTTTAGTTGCAACAAGATATAAGAACCGTGGAAAGGGCTACTTCCAAACACTTTTCTCGTGCATTGAGAGGCTGCTGGCTTTCTTGAATGTGAAAAATCTTGTGCTACCGGCTGCTGAAGAAGCAGAATCTATATGGACAGAAAAATTCGGGTTTAGCAAGGTGAAACCCGACCAGCTTACCAACTATAGAATGAACTGCCACCAGATTATGGCATTCAAAGGGACAATTATGCTTCATAAAACGGTGCCTCGATGCCGGGTCATCAATACTCAATCACGAGAAGTCTATATACAAGAATGTCAATCGTGA 2316 0.4421 MESTSAVSTQQHQRVNGYLVYTRRKRILHSDNDPAKRLKTGHNAEIKVESESQVPHDVVFGALKVESEDSVSANAEELTKVELKTSKKIIVVNKKPVTVKELFHTGLLDGVPVVYIGCKKDSTSGLRGVITGGGILCSCRLCNGRRVIPPSQFEIHACNIYKRAAQYICLENGKSLLELMRACRAAPLHTLEATIQNFVSSPPEEKYFTCKNCRGCFPSSNAERVGLLCLSCVESRKSEDSSIHAVGKRVRSPRPVLFSRSCSCCTSELCITPQTKRHWKTRTKSPKLSVKLKTAPITSKCLSPQNKSQWRISKRHQRIHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRSGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYVCVVCWDGGNLLLCDGCPRAFHKECASVSSIPRGEWYCQICQHMFLRDRPVLYNNADAVAAGRVEGVDPIEQIAKRCIRIVKDIGAEIGGCVLCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCTRIHSTLENLLVSVAERLPEPLLDVIKKKQVERCLEPLNGIDVRWKLLNGKIASPETRPLLLEAVSMFHECFDPIVDPAAARDLIPAMVYGSSVVSAGMLRIFGRDIAELPLVATRYKNRGKGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESIWTEKFGFSKVKPDQLTNYRMNCHQIMAFKGTIMLHKTVPRCRVINTQSREVYIQECQS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4642g00004 771 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 499 561 - -
Mupr4642g00004 771 SUPERFAMILY FYVE/PHD zinc finger 497 556 IPR011011 -
Mupr4642g00004 771 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 400 478 - -
Mupr4642g00004 771 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 639 725 IPR016181 -
Mupr4642g00004 771 PANTHER AUTOIMMUNE REGULATOR 40 750 - -
Mupr4642g00004 771 SMART PHD_3 413 454 IPR001965 -
Mupr4642g00004 771 SMART PHD_3 502 559 IPR001965 -
Mupr4642g00004 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 501 561 IPR013083 -
Mupr4642g00004 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 399 474 IPR013083 -
Mupr4642g00004 771 SUPERFAMILY FYVE/PHD zinc finger 399 455 IPR011011 -
Mupr4642g00004 771 ProSitePatterns Zinc finger PHD-type signature. 414 453 IPR019786 -
Mupr4642g00004 771 ProSiteProfiles Zinc finger PHD-type profile. 411 456 IPR019787 -
Mupr4642g00004 771 Pfam Tify domain binding domain 348 397 IPR032308 -
Mupr4642g00004 771 Pfam Tify domain binding domain 128 183 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4642g00004 Mupr-Chr4642 44544 55599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4642g00004 86 758 PHD Transcription Factor Family AT2G36720 48.564 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4642g00004 - - gmx:100798276 1347.8