Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4640g00001 ATGCCTCTGAGACAGATGAGAGAGAGCTCAGAGCAGCACCTTGTGATCAAATCCCATTTGCAGAACCCCATGAATGCATCTAAGAAGGTTACTAGAGCTGTTCAAAATGGGAAAGGTCCACCACCACTCCCACAGGAACCCCACAACCAAACTTCACCTCATGCAAGGAACAAGGGGAGAAGGAGGACTAGAGGTGGCAGAAAGTGTGACCAGGGAGATGTTCTGATGAGACCTATTGTCACAAGTACTGTTGAAAATGGCAGCACCATGTGTGGTGAAATAGAGATGAGTTACCCTACTTCATGCAAGTCTTTGAGCTTTGCTCCTAGGCCTGGCTTTGGACAAGTTGGGACAAAGTGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAGTATGATGTCAGTATTACCCCCGAAGTGTCTTCCAAAGCAGTGAATAGGTCCATTATAGGAGAACTTGTGAGGCTGTATAAAGAGTCTGACCTTGGGATGAGGCTTCCTGCATATGATGGCAGAAAAAGTCTGTACACTGCAGGGGCACTTCCCTTTTCCTGGAGAGAGTTTAAGATAAAGATTGTGGATGATGAGGATGGAGTTAATGGCCCCAAAAGGGAAAGAGAATATAGAGTGGTGATCAAGTTTGTTGCTAGGGCAAACTTGCATCACTTGGGCCAATTTCTAGCTGGTAAGCGTGCTGATGCCCCACAGGAAGCACTCCAAATTCTTGACATTGTATTAAGAGAGCTATCATCTAAGAGGTTTTGCCCAATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCTCAACGGCTTGGAGAGGGTTTGGAGTCGTGGTGTGGATTTTACCAAAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCTTCTGCCGCGTTCATTGAACCTCTTCCAGTTGTGGACTATGTTGGCCAGCTATTAGGAAAAGATATCCTGTCGAGGCAATTGTCTGATGCTGATCGCATTAAAATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACCCACAGAGGGAGTGTTAGAAGAAAATATCGTGTCTCTGGTTTGACTTCTCAACCAACCAGAGAACTTGTGTTTCCCGTTGATGAGAACTCAACTATGAAGTCGGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATAAAATATACCCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAATTATTTACCCATGGAGGCTTGCAAAATTGTTGAGGGACAACGATATACAAAAAGGTTGAATGAGAAGCAAATCACTGCTCTCCTGAAAGTTACCTGCCAAAGACCTCGTGATCGAGAAAATGACATTTTGCAGACTATTCAGCACAATGCTTATGACGAAGATCCTTATGCAAAGGAATTTGGGATTAAAATAAGTGAAAAGCTAGCTTCTGTAGAAGCGCGAATTCTTCCTGCCCCTTGGGTAATGTGCTTCTCCTCCTCCAAAAAGCTTAAATATCATGAAAGTGGGAAAGAAAAAAATTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGGTATTGTACATTGATATTGCAACTATCTGTTTTCAAGCAGTCAAAATGATTAATGGAATGACTGTCAGCCGGTGGGCATGCATAAATTTTTCACGAAGTGTGCAAGATAGTGTTGCTCGCACTTTTTGTAACGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATACCCATCTACAATGCCAAACCTGAGCATGTCGAGAAAGCTTTGAAGCATGTTTACCATGTGTCAACAAACAAGACCAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCTGACAACAATGGTTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACTGATCTTGGTTTAATTTCTCAATGTTGTTTGACAAAGCATGTCTTTAAGATCACTAAGCAGTACTTGGCTAATGTGTCTTTGAAAATCAATGTCAAGATGGGAGGTAGAAACACTGTGCTTGTTGATGCAGTAAGCTGCAGAATACCATTGGTTAGTGACATACCAACTATAATATTTGGAGCAGATGTTACCCATCCTGAAAACGGAGAAGACTCCAGCCCCTCGATAGCAGCTGTAGTAGCATCCCAAGACTGGCCTGAAGTGACAAAATATGCCGGTTTAGTGTGTGCTCAAGCTCATAGACAGGAACTTATACAAGATTTGTACAAAATGTGGCATGACCCTGTTCGTGGCTTAGTCAGTGGTGGCATGATTCGAGATTTGTTGATTTCCTTTAGAAAGGCAACAGGACAGAAGCCTCTAAGGATTATATTTTATAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTCTACTTTATGAGTTGGATGCAATTCGGAAGGCATGTGCTTCTTTAGAACCAAACTATCAACCTCCAGTAACTTTCATAGTTGTACAAAAAAGACACCATACTCGGTTGTTCGCAAACAACCACAGGGACAGGAACAGTACAGATAAGAGTGGAAATATACTGCCTGGGACTGTTGTTGATTCCAAAATTTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACGAGTCGTCCAGCTCATTATCATGTTCTATGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTTTGACAAACAATCTCTGTTATACATATGCCAGGTGTACACGCTCAGTATCCGTTGTTCCTCCAGCATATTACGCACATTTGGCAGCTTTTCGAGCGCGGTTCTACATGGAACCGGACCTGCAGGAAAATGGCTCCTCTGGTGGCGGTTCGAAAGCAACACGAGCTGGTGGAGAGTATGGGGTCAAGCCATTGCCAGCACTGAAAGAAAATGTGAAGAGAGTAATAAAATAA 2961 0.4259 MPLRQMRESSEQHLVIKSHLQNPMNASKKVTRAVQNGKGPPPLPQEPHNQTSPHARNKGRRRTRGGRKCDQGDVLMRPIVTSTVENGSTMCGEIEMSYPTSCKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVSITPEVSSKAVNRSIIGELVRLYKESDLGMRLPAYDGRKSLYTAGALPFSWREFKIKIVDDEDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVDYVGQLLGKDILSRQLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTIQHNAYDEDPYAKEFGIKISEKLASVEARILPAPWVMCFSSSKKLKYHESGKEKNCLPQVGQWNMMNKVLYIDIATICFQAVKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEHVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKMWHDPVRGLVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSSGGGSKATRAGGEYGVKPLPALKENVKRVIK 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4640g00001 986 SUPERFAMILY Ribonuclease H-like 618 948 IPR012337 -
Mupr4640g00001 986 SMART PAZ_2_a_3 319 451 IPR003100 GO:0005515
Mupr4640g00001 986 Gene3D - 695 985 IPR036397 GO:0003676
Mupr4640g00001 986 CDD PAZ_argonaute_like 314 428 - -
Mupr4640g00001 986 FunFam Protein argonaute-2 308 434 - -
Mupr4640g00001 986 FunFam protein argonaute 10-like 695 986 - -
Mupr4640g00001 986 SMART DUF1785_2 262 314 IPR014811 -
Mupr4640g00001 986 MobiDBLite consensus disorder prediction 18 32 - -
Mupr4640g00001 986 ProSiteProfiles Piwi domain profile. 626 947 IPR003165 GO:0003676
Mupr4640g00001 986 Pfam Argonaute linker 2 domain 455 500 IPR032472 -
Mupr4640g00001 986 FunFam Argonaute 10 503 689 - -
Mupr4640g00001 986 Pfam PAZ domain 341 445 IPR003100 GO:0005515
Mupr4640g00001 986 CDD Piwi_ago-like 473 946 IPR045246 -
Mupr4640g00001 986 Gene3D paz domain 308 433 - -
Mupr4640g00001 986 ProSiteProfiles PAZ domain profile. 315 429 IPR003100 GO:0005515
Mupr4640g00001 986 Pfam N-terminal domain of argonaute 119 253 IPR032474 -
Mupr4640g00001 986 Pfam Mid domain of argonaute 546 612 IPR032473 -
Mupr4640g00001 986 Pfam Argonaute linker 1 domain 263 312 IPR014811 -
Mupr4640g00001 986 SMART Piwi_a_2 626 947 IPR003165 GO:0003676
Mupr4640g00001 986 MobiDBLite consensus disorder prediction 18 70 - -
Mupr4640g00001 986 SUPERFAMILY PAZ domain 309 469 IPR036085 GO:0005515
Mupr4640g00001 986 Gene3D - 493 689 - -
Mupr4640g00001 986 Pfam Piwi domain 627 946 IPR003165 GO:0003676
Mupr4640g00001 986 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 99 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4640g00001 Mupr-Chr4640 6229 14635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4640g00001 1 985 Eukaryotic Initiation Factors Gene Family AT5G43810 79.684 0.0 1630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4640g00001 K11593 - gmx:100819073 1841.62