Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4639g00007 ATGCAACCATTTAGTCACTTGGTTGTGCCCTTCAAATTTGCGGCGTTCTTGTGCTTCAGAGGTGATACTAGGTACACTTTTACTGAGAACCTCTTCCAAGCTCTCCTCCATCGAGGATTCCGCACCTTCAAGGATAATCCCGTCATGGAAAGAGGCACCAGAATCACGGTAGAACTTCCCCGGGCAATTGAGGTGTCCAGGGTTTTTATTATCGTTCTGTCCAAGAACTTTGCTTCTTCTTCATACTGCTTATTTGAAGTTGTTAAGATTCTTGATGAGTTTGCTAAGGGAAAGGGTCGATGGATTTTGCCGGTTTTCTACTACGTTGATCCGTCTGATCTGCTTGATACTTATGAGCAAGCATTGATTGATATGAAGGAGTGGTATTCGGATGAGCAGATACAAGAGTGGAGGACTGCTTTGAGTAAATTATCTAAGAACAAGAATGGATGTGAGAATAAATTTGAATACCAGCATATTGAGGATATCCTTAAAGAGGTCTCTAGACATGTTACTAGCCCAATTGGACTTGGTGGACGGATATTAACTGTTAATTTGCTTCTGTGCTCTGGATCAGATCGAATCCACATGATCGGGATATGTGGCGGATCTGGAATTGGTAAAACAATGGTAGCACTTGAACTTCTTAACTTCCATGCTGACATGGGATTTGATCACTGTTTCTTTTTTTCTGATGTGGGAGAAATTTTAAGTAAGTTTGGAAATGTTGAAGGAATGTCAATACTCAACGGGAAAAAAGTTTTTATAGTTTTTGAGGATATTAAACAATCCGAGCAGTTGGATAACATTAGGGAACTAACTAAGCAGCTTGGTTTTGGCAGCAAAGTCATTATTATATCTCAAGATAAGAATTTGCTTACAAGATGTGGGATTGAAAATATATACGAAGGAGAAAGGTTTAGCGATACAGAAGCTTATCAATTGCTTAGTTTGAAAGTATTTAATTCTACAAGTATTAGTCCTAAGTTTGTGAAAATTTTAGAGCGAATTGTGACTTATGCCCTTGGTCATCCTAGGACTTTGGAAGTAATTGGTTCCAACGTGAGTGGAAAAACAATAAAAGAATGTGAATCTGCATTACTTACGTATGAATCAATAACAAATAGAGACATCCAAAAGATAGAAGAAGAAAGCTTTAATGCTTTGGAGAAATGTCAGCAGGAGATGTTAATTCACATTGCATTGTGTCTCAGAGGATTGGAGTTGGTAGATGTTGAAGCCAAACTTCATAATAAGTATGAAGTCTGCCCCAGAAAAGATATTAGAGTGATGTTGCATGCCTCTACACAGGACATGATTAAAGATAAAGTTTCACATTTTGAGGCTATGTGGCATGGACATGGGCAGCATAAGTCAAATGATATTAAATATGAGCAACATGATAAGCAATACAAAGAAGACATTTTGGAATTGGGACCATTCGAAACAAAGAATCCTTGTTTTGAATGTCTTTAA 1476 0.378 MQPFSHLVVPFKFAAFLCFRGDTRYTFTENLFQALLHRGFRTFKDNPVMERGTRITVELPRAIEVSRVFIIVLSKNFASSSYCLFEVVKILDEFAKGKGRWILPVFYYVDPSDLLDTYEQALIDMKEWYSDEQIQEWRTALSKLSKNKNGCENKFEYQHIEDILKEVSRHVTSPIGLGGRILTVNLLLCSGSDRIHMIGICGGSGIGKTMVALELLNFHADMGFDHCFFFSDVGEILSKFGNVEGMSILNGKKVFIVFEDIKQSEQLDNIRELTKQLGFGSKVIIISQDKNLLTRCGIENIYEGERFSDTEAYQLLSLKVFNSTSISPKFVKILERIVTYALGHPRTLEVIGSNVSGKTIKECESALLTYESITNRDIQKIEEESFNALEKCQQEMLIHIALCLRGLELVDVEAKLHNKYEVCPRKDIRVMLHASTQDMIKDKVSHFEAMWHGHGQHKSNDIKYEQHDKQYKEDILELGPFETKNPCFECL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4639g00007 491 PRINTS Disease resistance protein signature 341 355 - -
Mupr4639g00007 491 PRINTS Disease resistance protein signature 197 212 - -
Mupr4639g00007 491 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 445 IPR044974 GO:0006952
Mupr4639g00007 491 Pfam TIR domain 12 164 IPR000157 GO:0007165
Mupr4639g00007 491 Pfam NB-ARC domain 247 390 IPR002182 GO:0043531
Mupr4639g00007 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 399 IPR027417 -
Mupr4639g00007 491 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 145 IPR035897 -
Mupr4639g00007 491 Gene3D - 181 300 IPR027417 -
Mupr4639g00007 491 Gene3D - 306 397 IPR042197 -
Mupr4639g00007 491 ProSiteProfiles TIR domain profile. 11 145 IPR000157 GO:0007165
Mupr4639g00007 491 Coils Coil 134 154 - -
Mupr4639g00007 491 SMART till_3 12 147 IPR000157 GO:0007165
Mupr4639g00007 491 Gene3D - 10 174 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4639g00007 Mupr-Chr4639 42292 44890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4639g00007 62 353 WRKY Transcription Factor Family AT4G12020 22.769 5.12e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4639g00007 - - gmx:106795499 551.206