Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4639g00006 ATGGCGATACATTTATACAAAACTTCTACCCCAAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATCATTTGATCTATGGACAGCATCGTTGTGGTAAAGGCCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAAACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATAGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAAATATATTTTACACCCCAGAGGGGCTATAATCGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCGAAACTAATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCAGGGGAGGTCCGTTTGATATCAAAAAACTGCTCGGCAACAGTCGGACAAGTGGGAAATGTTGGGGTAAACCAGAAAAATTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTTTCTTTCTTCAAAATTCTTGA 660 0.4227 MAIHLYKTSTPSTRNGAVDSQVKSNPRNHLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEKKYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGFFLQNS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4639g00006 219 Pfam Ribosomal Proteins L2, RNA binding domain 40 116 IPR022666 GO:0003735|GO:0005840|GO:0006412
Mupr4639g00006 219 MobiDBLite consensus disorder prediction 1 22 - -
Mupr4639g00006 219 FunFam 50S ribosomal protein L2, chloroplastic 1 112 - -
Mupr4639g00006 219 SUPERFAMILY Nucleic acid-binding proteins 2 123 IPR012340 -
Mupr4639g00006 219 SMART Ribosomal_L2_C_2 122 219 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mupr4639g00006 219 NCBIfam 50S ribosomal protein L2 3 214 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Mupr4639g00006 219 SMART Ribosomal_L2_2 40 116 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mupr4639g00006 219 PANTHER RIBOSOMAL PROTEIN L2 36 213 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mupr4639g00006 219 Pfam Ribosomal Proteins L2, C-terminal domain 123 214 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mupr4639g00006 219 SUPERFAMILY Translation proteins SH3-like domain 125 214 IPR008991 -
Mupr4639g00006 219 FunFam 50S ribosomal protein L2, chloroplastic 116 194 - -
Mupr4639g00006 219 Gene3D - 1 112 IPR012340 -
Mupr4639g00006 219 Gene3D - 116 195 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4639g00006 Mupr-Chr4639 37708 38643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4639g00006 51 211 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 31.073 1.33e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4639g00006 K02886 - gmx:3989337 426.787