Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4631g00001 ATGGAGTCCGATTCAGACTCCGACGGATCTCACGTCTCCGCAACTCCACCAAGACAATCAAGTCCATCACCACCGCGGCCGCCACCACGACAACCACCTGTCGTGGTTTCAAACAAATCCAGAATCAGAATCAAACCCTCGAAATCAAAACCAGCCCCGTCCGGACACTCCAAACCGCCGTCGACGCCCGACCCGATCCAGCAAGCCCCTCTCCCCCTCCCCGCCGATCTCCCCTTCCAAATTCGGCGGCCTTCTGCGCCGTCAATTTCCCACTCCTTCGAAACCCTCCCCGCCGGCTACTTCTCCTCCCACTCCGCTTCCTTCTCCAAGATTCGAAGACCGCTCGGAAATCTAGAACCTTCTGGAACCGAACCAGCTCCTAGCCCCGCCGCGTCCGATTCACGCGCCACGGTCGAGAGTGCGGAAGCGAGAAAACGTGGAAAGAAGCAGCTTCCCAACCTCATAGGCGCCAGCGCGCCGATGCCGAGCGTGAAGCCGCGAACATGCGGCGGCGGTGAAGGGAACTTCGTGAGGCTGAACCTGAGTGGCAAGAGAAAGAAGTTCGTGAACAAGAAAGGGAAAGGGAAATTCGGCGGGAAAAGGTACAAGAGAGGGAAATTTAAATTGCAGAAAGAAAGGGAGGATCGAGAGGAGACTGTTGGAGAAGTGAAGCAGAGAGGAGGGAGGGAGATTGATTGCCATGCGGTGGAAGAGGCTGTGGCCGCGGCGCGCGTTGAGCCTTCGGAGGAGAACTTGGTCAAGTTGTTGAAATTGGTTTATGGTTATGACTCTTTTCGAGATGGACAGATTGAGGCAATTAAGATGGTTCTTGCTGGGAAGTCGAGTGTGCTTGTTTTGCCCACCGGCGCTGGGAAGTCTCTGTGTTATCAGTTGCCTGCTGTGATTTTGCCTGGGATTACATTGGTTGTTAGTCCATTGGTGGCTTTGATGATTGATCAGCTCAGGCAATTGCCTCATGTCATTAGGGGTGCTCTTCTCTCCAGCACTCAGACGCCTGAAGAAGCCTCTGAATCACTCAAGCAGCTTCAACAAGGGGAGATAAAGGTGCTTTTTGTTTCTCCGGAGCGGTTTCTGAATGAAGAGTTTCTGTCCACTATTTCTTCTTTGCCAGCCATCTCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCTTCGTTTATGAGACTTAGAGCATCTCTGCTTCATAAGATACTTAATGTTCGTTCTGTGCTTGCAATGACAGCAACTGCTACAACCACAACTTTAGATGCCATCATGTCTGCTCTAGATATTCCTTACACAAATCTCATTCAAAAGGCGCAAATGAAAGACCTACTGATTTTGATAAAGTCTCCTCCTTTTGCGGAAGTTCAAAGCATCATCATATACTGCAAATTTCAGTATGAAACTGATCAAGTTAGCAGATATTTGAATGATAACAATATCTTGGCAAAGAGTTATCATAGTGGTATCACTGCAAAGGAACGAAGCTATGTACAGGAGTTGTTTAATTCCAACAAGATCAGAGTGGTTGTCGCAACTGTGGCATTTGGCATGGGACTAGATAAGAGAGATGTTGGAGCTGTAATTCATTACAGTTTGCCTGAAAGTCTGGAAGAGTATGTACAGGAGATAGGACGTGCTGGAAGGGATGGGAGGTTGTCCTACTGTCACCTATTTTATGATGATGAGACATATTTCAAACTTCGTAGTCTAATGCACAGTGAAGGAGTAGATGAATATGCAGTGAACAAATTTCTGCGTGAAGTGTTTCCTGCTGACAAAAACTCGTGTGGGAAAATCTGTTCATTAATCAGAGAATCTGCTTCACGCAGGTTTGATATGAAAGAAGAGGTGATGGTTACACTTTTGACACGCTTGGAGTTGGGTGATGTGCAGTACTTGCAGTTACTTCCACAGATAAATGCAACTTGCACTTTGGCTTTTCACAAGACTCCTCCGCCATTACTTGCATCAAAGGTTTCTGCTATATCTGTAATTCTAAAAAGATCTGAAAATAAGCACGGGCAATATATTTTTGACATTCCAACTGTGGCAAATGACATGGGGGTTACAGCAGTTGAATTAACAAATCAGTTGTACGACCTGAAGTTGATGGGAGAAATAACTTATGAAATGAAGGACTTGGCATACTGTTACAGGATCGTTGAAGTGCCAACAGACTTGTTATCTCTATCAGCAGATATTACCCAATGGTTATCAGAGGTTGAAAATTGTAAGGTACGAAAAATGGATGCAATGTTTAATGCTGTATATTTTGCATTAAATCTATGTGATAAGATGCAAGGTTGCAGTGGTGCCGATCACACACCATGCTTGCAAAGGAAAATATTGGATTACTTTTCTGGAGTTGATAATACTGATTTCTGCAAGAAAATTGGACAAAGCAGCCCTTTCCTGCGGGCAGATATAAAGGTCTTTCTGCAGAGCAATTCACAGGCTCGATTTACACCAAGAGCCGTTGCGAGGGTAATGCACGGAATTGCAAGCCCAGCCTATCCTTCAACGGCATGGAGTAGAACACATTTC 2574 0.4604 MESDSDSDGSHVSATPPRQSSPSPPRPPPRQPPVVVSNKSRIRIKPSKSKPAPSGHSKPPSTPDPIQQAPLPLPADLPFQIRRPSAPSISHSFETLPAGYFSSHSASFSKIRRPLGNLEPSGTEPAPSPAASDSRATVESAEARKRGKKQLPNLIGASAPMPSVKPRTCGGGEGNFVRLNLSGKRKKFVNKKGKGKFGGKRYKRGKFKLQKEREDREETVGEVKQRGGREIDCHAVEEAVAAARVEPSEENLVKLLKLVYGYDSFRDGQIEAIKMVLAGKSSVLVLPTGAGKSLCYQLPAVILPGITLVVSPLVALMIDQLRQLPHVIRGALLSSTQTPEEASESLKQLQQGEIKVLFVSPERFLNEEFLSTISSLPAISLVVIDEAHCISEWSHNFRPSFMRLRASLLHKILNVRSVLAMTATATTTTLDAIMSALDIPYTNLIQKAQMKDLLILIKSPPFAEVQSIIIYCKFQYETDQVSRYLNDNNILAKSYHSGITAKERSYVQELFNSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMHSEGVDEYAVNKFLREVFPADKNSCGKICSLIRESASRRFDMKEEVMVTLLTRLELGDVQYLQLLPQINATCTLAFHKTPPPLLASKVSAISVILKRSENKHGQYIFDIPTVANDMGVTAVELTNQLYDLKLMGEITYEMKDLAYCYRIVEVPTDLLSLSADITQWLSEVENCKVRKMDAMFNAVYFALNLCDKMQGCSGADHTPCLQRKILDYFSGVDNTDFCKKIGQSSPFLRADIKVFLQSNSQARFTPRAVARVMHGIASPAYPSTAWSRTHF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4631g00001 858 SMART ultradead3 261 458 IPR014001 -
Mupr4631g00001 858 Pfam DEAD/DEAH box helicase 267 429 IPR011545 GO:0003676|GO:0005524
Mupr4631g00001 858 Gene3D - 234 441 IPR027417 -
Mupr4631g00001 858 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 273 443 IPR014001 -
Mupr4631g00001 858 SMART helicmild6 479 560 IPR001650 -
Mupr4631g00001 858 FunFam ATP-dependent DNA helicase Q4 233 441 - -
Mupr4631g00001 858 CDD SF2_C_RecQ 444 569 - -
Mupr4631g00001 858 MobiDBLite consensus disorder prediction 1 93 - -
Mupr4631g00001 858 MobiDBLite consensus disorder prediction 18 34 - -
Mupr4631g00001 858 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 449 606 IPR001650 -
Mupr4631g00001 858 NCBIfam RecQ family ATP-dependent DNA helicase 255 587 IPR004589 GO:0004386|GO:0006310
Mupr4631g00001 858 CDD DEXHc_RecQ4-like 253 446 - -
Mupr4631g00001 858 MobiDBLite consensus disorder prediction 112 170 - -
Mupr4631g00001 858 Pfam Helicase conserved C-terminal domain 466 559 IPR001650 -
Mupr4631g00001 858 Gene3D - 442 627 IPR027417 -
Mupr4631g00001 858 MobiDBLite consensus disorder prediction 56 72 - -
Mupr4631g00001 858 FunFam ATP-dependent DNA helicase Q-like 5 442 627 - -
Mupr4631g00001 858 PANTHER DNA HELICASE RECQ FAMILY MEMBER 240 747 - -
Mupr4631g00001 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 579 IPR027417 -
Mupr4631g00001 858 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 380 389 IPR002464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4631g00001 Mupr-Chr4631 628 9405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4631g00001 469 592 Eukaryotic Initiation Factors Gene Family AT3G19760 30.952 8.33e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4631g00001 K10730 - gmx:100811214 1362.82