Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4627g00004 ATGGCGTTCTTCAATAAAATTGGAAATCTTCTCAAGAATTCTGCTGTCAAGCACATCAATCAAGATTTTTCTGTGTCTACTCCTTCAGTTTTCCAAGCAATTAGATCCATGTCATCTGCAAAGCTTTTTGTCGGAGGTATTTCTTACAGCACCGATGATATGAGTCTGCGAGAGGCTTTTGCTCGCTATGGAGAAGTAATTGATGCTAAGGTTATTATGGATCGTGAGACTGGCAGGTCAAGAGGTTTTGCCTTTATAACTTTTGCAACGAGCGAGGATGCATCTTCTGCTATTCAGGGCTTGGATGGCCAGATTAATCTTGCTGATGCCTGCAAATTTTGTAAGGTTGGCAATGTTTCTTTGGCATCTCAAATAGTTGTGTTGCAGGATCTTCATGGTAGGAGGGTACGTGTGAATTATGCTACAGAAAGGTCACGTCCAGGGTTTGGTGGCGGTGGTGGCTATGGTGGTGGTGGCTATGGCGGTGGTGGCAGCTATGGGGATGGTAACTATGGAGGTAATAGGGGTGGAAGCTATGGAAATAGTGGTTATGGTGTTACGAACAGCTATGGTGGTGGTGGTGCTAGTAATTATGAATTCAGTGGGGATTTTGGGTCAGCTGGCGGTAGCAACCAAAATGAGGGAACAGGTGCAGACAATGATGAAGACAGTCATGCAAGGGAGAGCAATGATGAACATCATGGCTTCGCTCAGAGCAAGTAA 723 0.4495 MAFFNKIGNLLKNSAVKHINQDFSVSTPSVFQAIRSMSSAKLFVGGISYSTDDMSLREAFARYGEVIDAKVIMDRETGRSRGFAFITFATSEDASSAIQGLDGQINLADACKFCKVGNVSLASQIVVLQDLHGRRVRVNYATERSRPGFGGGGGYGGGGYGGGGSYGDGNYGGNRGGSYGNSGYGVTNSYGGGGASNYEFSGDFGSAGGSNQNEGTGADNDEDSHARESNDEHHGFAQSK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4627g00004 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 104 IPR000504 GO:0003723
Mupr4627g00004 240 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 217 - -
Mupr4627g00004 240 CDD RRM2_NsCP33_like 41 141 - -
Mupr4627g00004 240 SUPERFAMILY RNA-binding domain, RBD 16 158 IPR035979 GO:0003676
Mupr4627g00004 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 143 IPR000504 GO:0003723
Mupr4627g00004 240 SMART rrm1_1 41 115 IPR000504 GO:0003723
Mupr4627g00004 240 MobiDBLite consensus disorder prediction 201 240 - -
Mupr4627g00004 240 Gene3D - 32 182 IPR012677 -
Mupr4627g00004 240 MobiDBLite consensus disorder prediction 203 217 - -
Mupr4627g00004 240 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4627g00004 Mupr-Chr4627 34253 36131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4627g00004 10 103 Eukaryotic Initiation Factors Gene Family AT3G16380 36.170 6.54e-10 57.0