Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4621g00001 ATGAGTTGCTTTTCGTGCTTCGTTTCTCGCCGGAACGATGTGAGCAGGGTTGAGGTTGACAATGCTCGATCTGCTACTGCTACTTCTTCAGAAGGTGAAAGGAATAGAGAATCCTCGGAGGGGCAGGGGAATGGTGTGAGTGGGAGTAGTAGCAAAGGAAATACGGCGGCGGCTAGTTTTGGTTTTCGCGAGCTCGCGGCGGCGACGAGGGGTTTCAAGGAAGTGAACTTGATTGGGGAAGGTGGTTTTGGGAGGGTTTACAAGGGTCGTCTTTCAACGGGCGAGGCAAATTTTGGTCATTTCAATCTTGTTGCTGTAAAACAACTGAGTCATGATGGTAGGCAAGGTTTTCAGGAATTTGTGACTGAGGTTCTTATGTTGAGCCTGCACCACCATTCCAATCTTGTCAAGTTGATTGGCTACTGCACTGATGGGGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGTTCACTTGAAGATCATCTTTTTGATCCTAACCAAGACAAAGAACCCCTAAGTTGGGGAGTTCGAATGAAGATTGCTGTTGGAGCTGCTCGTGGCCTTGAGTATCTCCATTGTAAAACAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCGAACATCTTATTAGATAATGAATTCAACCCAAAACTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACCAGAGTGATGGGAACATATGGCTACTGTGCGCCAGAGTATGCCATGAGCGGCAAATTAACTCTTAAATCTGATATCTATAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGGGCAATAGATGCTGCTAAAAAACCAGGAGAGCAAAACTTGATTTCATGGTCTCGTCCATTTTTCAGCGACAAGAGAAAGTTTGTAGATATGGTTGACCCTCTTTTACAAGGAAACTTCCCCTTACGCTGTTTGCATCAGGCAATTGCTATAACCGCTATGTGTCTCCAGGAGCAACCAAAATTCCGTCCATTTATTGGTGACATTGTTGTTGCACTGGAATACCTAGCTTCTCAGAGTATCCCAGAAGTCCATAGATCACCACCTTCAGAAATGGACGGAAATTAA 1125 0.448 MSCFSCFVSRRNDVSRVEVDNARSATATSSEGERNRESSEGQGNGVSGSSSKGNTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGEANFGHFNLVAVKQLSHDGRQGFQEFVTEVLMLSLHHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPNQDKEPLSWGVRMKIAVGAARGLEYLHCKTDPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDAAKKPGEQNLISWSRPFFSDKRKFVDMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPFIGDIVVALEYLASQSIPEVHRSPPSEMDGN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4621g00001 374 MobiDBLite consensus disorder prediction 21 52 - -
Mupr4621g00001 374 Gene3D Phosphorylase Kinase; domain 1 46 154 - -
Mupr4621g00001 374 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
Mupr4621g00001 374 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Mupr4621g00001 374 Gene3D Transferase(Phosphotransferase) domain 1 155 366 - -
Mupr4621g00001 374 SMART serkin_6 72 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4621g00001 374 FunFam Somatic embryogenesis receptor kinase 1 48 154 - -
Mupr4621g00001 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Mupr4621g00001 374 SUPERFAMILY Protein kinase-like (PK-like) 57 353 IPR011009 -
Mupr4621g00001 374 PANTHER OS07G0668900 PROTEIN 3 360 - -
Mupr4621g00001 374 CDD STKc_IRAK 78 353 - -
Mupr4621g00001 374 ProSiteProfiles Protein kinase domain profile. 72 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4621g00001 374 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4621g00001 Mupr-Chr4621 6323 9707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4621g00001 1 372 Glycoside Hydrolase AT3G07070 55.584 3.32e-146 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mupr4621g00001 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4621g00001 - - gmx:100796595 578.556