Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4600g00004 AGCAACAAAGGATCGACGTTGTTGCTTCTTGCTCTAACTATTCTTCCATGGCATCATGCATCTAAAAAACATGATGTTTTTCTAAGCTTTGGAGGTGAAGACACACGTAGGAACTTCACAAGCTATCTACATAAAGCTTTGAATGAAGAGAAACTGTTGGAATGCATAATGGCTGAGCAGCTAATGATGAGTGGTGTTGCTGCTGCTTCTAAAAAATATGAAGTTTTTCTAAGCTTTCGAGGTGAGGACACTCGCAGGAACTTCACAAGCCATCTATATAAAGATTTGAATAAAGAGAAAGTCAAAACCTACATAGATGAGCAGATTGAAAAGGGAGATGAAATCTCAGAAGTACTGAGCAAAGCAATAGAAGAATCTCATGTATCTGTTGTCATATTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTGAATGAACTGAGCAAGATCTTGGAATGCAGGAAAGAAAAAGGACAGATTGTGATACCGGTGTTCTATAACATAGATCCATCCCATGTAAAGAATCAGACTGGGAGCTACGAGAAAGCCTTTGCAAAACATGAGGGAGAAGTCAGGTGCAACAAATGGAAAGATGCTCTCACTGAAGCAGCCAATTTAGCTGGGTGGGATTCTCGAACTTATAGGACTGATCCTGAATTGCTTAAGGACATTGTTGGAGATGTTTTGGGAAAATTGCCTCCTAGATACAAAACCCAACGTAAAGGACTGGTTGGAGTTGAGGAACATTATAAACAGATTGAGTCATTACTAAAAATTAGGTCTAGTGAAGTTAGAACCCTTGGAATATGGGGCATGGGTGGAATTGGTAAAACCGCCCTTGCTAATGCTTTATATGATGAATTGTCTCATGAGTTTGAAGGTTGTTGCTTCCTCACAAAGGTTGTTGATAAGTCTGAGATGAGTAGGCTTAGAGGTAAAAGAGTTTTCATTGTCTTGGATGATGTGGCTACTTCAGAGCAATTTGAAAAGCTAATTGGAGAATTTGATTTCTTGGGACCAGGAAGTAGGGTCGTTGTTACAACTAGAAATATTCAAATACTTAGTCCAGTTGATGAAATATATTTAGTCCAGGAATTGAGCTATCATTACTCTCTTCAGCTTTTCTGTTTGACTGTTTTTGGAGAAAAACAACCTAAAGATGGATATGAAGATTTATCAACAAGAGTAATTTCCTATTGCAAAGGTATTCCTCTGGCTTTAAAAGTTTTGGGTGCAAGTCTTCGTAAAGCAAGTAAAGAGGTATGGGAATGTGAATTGAGAAAACTCCAAAAGATTCCAAATATGGAAATTCATAACACATTAAAATTAAGTTATGATGGTTTAGATTGTTCTCAAAAGGAAATCTTTTTAGACCTTGCATGCTTCTTCAAAGGAGTAAAAAGAGATTGGGTAACTGGATTATTGGAAGCTTTTGGTTTCTTTCCAGCATCTGGGATACAAGTCCTTTTAGATAAAGCTCTAATAACAATTTCACGTGGCAAATGGATAGAAATGCATGACTTAACACAGGAAATGGGTCGGGAAATTGTTCATCAAGAATGTATGAAAGACCCTGGAAGGCGAAGTCGATTGTACAAACATGAGGAAGTGCTTCATGTTTTGAAACATAACAAGGGATCTGATGTTGTTGAAGGCATAATTTTAGATTTGCATAAATTAACTGAGGATCTATATTTGAGCTCTGATTCCTTTGCAATGATGATTAACCTGAGATTTCTTCAAATCCATAAAGGGTGGTGGAGTGACAACAAATTTAATGTGTACCTTCGTAATGGTCTTGAATCATTGTCTGATAAATTGAGGTACCTTCACTGGGATGAATGCTGTCTCGAGTCTTTGCCATCAAACTTTTGTGCTGAACACCTTGTAGAGCTTTGCATGCCTCGTAGCAAGCTTAAAAAGCTTTGGGATGGAGTTCAGAACCTTGTGAGTTTAAAGACAATTGACCTTTGGGATTCCCAAGACTTGATTGAGATCCCAAACTTATATAAGGCAGAAAAACTTGAAAGGGTATATCTTAATTATTGTAAAAGCTTGCAACAACTCCATGTTCATTCAAAATCTCTCGTTGTACTTGCCCTCTTAGGTTGTTCATCTCTCAAGAAAATCTCAGTGACATCAGAAGAAATGAAAGAATTAGACTTATCTTACACTGCTATACGTGCATTATCGTCATCAATTGGTCACTTATTGTCTTTAGAAACATTAGAACTAAGTGGAACTAATGTTGACATCTTGCCAGCAAAGATGAAACACCTTTCGATGATGAGAAAGTTGAAATTAGATGATCACTGCAAGAAACTCGTGTCTTTGCCAGAGCTTCCGGCATCCCTAAGAGAGCTTCATTTAAATAATTGCTGGAAGCTTGTGTCTCTACCAAAGCTTCCACCATCCTTGAAAGAAGTGAGTGCCTTTAACTGCATTTCTCTCAAGACAGACATCACTCAGCGGCTAGTGTTACAACACATGTTACATCAAAAATATCTTTATAGTCGTGCGTATATTGAAGGAGGGTATTTCATCTTCCCGGGAAGCCATGTCATGGATGAGTGTAGGTTTCATACAAAAGAGAGTTCAATAACTATTCCTTATCTTCCAAAATCTCACTTGTGTGGTTTTATTTATTGCATTGTCCTTTCTGAGGGACCAGTCTTAAAAGAACATCGGTTTTCTTGTGCCATCTATCGAGATGATATATTGCTAAGTTTGGACCGTCGTAGGTTTATAGGCTGCACAAATTTAATTTCGGACCATGTGTTATTTTGGTATCATGATATCAGCAAATTTGGTGGAATGAATGAAGCCTATGATCATTTCAGGCACATGACATTTATATTTAAATTTAATCATAATAGAGAGAGCATAAAAGGGTGTGGGGTCCTATGGGATGACTTGACGGAGAGATTCACTAAGGGAAACCATTTTCGAATCTCGAATTTATTGCACGAGATTCATTCGGTCAAGCATGGAAAAAGGTCAGTCTCTGAATTTTTTACTGATTTGAAAATTGTTTGGAAAGAATTAGAAGCTCTAAAAGCTATTCCAAATTGCACTTGTGCTGCTAAGAATGTGATTAAACTACAGAAAGAGTCAGAATATGTAATCTGTTTTCTCAAAGGTCTTGGAGAAACTTATGGAACTATAGAAGTCTGA 3174 0.3746 SNKGSTLLLLALTILPWHHASKKHDVFLSFGGEDTRRNFTSYLHKALNEEKLLECIMAEQLMMSGVAAASKKYEVFLSFRGEDTRRNFTSHLYKDLNKEKVKTYIDEQIEKGDEISEVLSKAIEESHVSVVIFSENYASSKWCLNELSKILECRKEKGQIVIPVFYNIDPSHVKNQTGSYEKAFAKHEGEVRCNKWKDALTEAANLAGWDSRTYRTDPELLKDIVGDVLGKLPPRYKTQRKGLVGVEEHYKQIESLLKIRSSEVRTLGIWGMGGIGKTALANALYDELSHEFEGCCFLTKVVDKSEMSRLRGKRVFIVLDDVATSEQFEKLIGEFDFLGPGSRVVVTTRNIQILSPVDEIYLVQELSYHYSLQLFCLTVFGEKQPKDGYEDLSTRVISYCKGIPLALKVLGASLRKASKEVWECELRKLQKIPNMEIHNTLKLSYDGLDCSQKEIFLDLACFFKGVKRDWVTGLLEAFGFFPASGIQVLLDKALITISRGKWIEMHDLTQEMGREIVHQECMKDPGRRSRLYKHEEVLHVLKHNKGSDVVEGIILDLHKLTEDLYLSSDSFAMMINLRFLQIHKGWWSDNKFNVYLRNGLESLSDKLRYLHWDECCLESLPSNFCAEHLVELCMPRSKLKKLWDGVQNLVSLKTIDLWDSQDLIEIPNLYKAEKLERVYLNYCKSLQQLHVHSKSLVVLALLGCSSLKKISVTSEEMKELDLSYTAIRALSSSIGHLLSLETLELSGTNVDILPAKMKHLSMMRKLKLDDHCKKLVSLPELPASLRELHLNNCWKLVSLPKLPPSLKEVSAFNCISLKTDITQRLVLQHMLHQKYLYSRAYIEGGYFIFPGSHVMDECRFHTKESSITIPYLPKSHLCGFIYCIVLSEGPVLKEHRFSCAIYRDDILLSLDRRRFIGCTNLISDHVLFWYHDISKFGGMNEAYDHFRHMTFIFKFNHNRESIKGCGVLWDDLTERFTKGNHFRISNLLHEIHSVKHGKRSVSEFFTDLKIVWKELEALKAIPNCTCAAKNVIKLQKESEYVICFLKGLGETYGTIEV 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4600g00004 1057 Gene3D - 307 360 IPR027417 -
Mupr4600g00004 1057 Gene3D - 235 306 IPR027417 -
Mupr4600g00004 1057 Gene3D Ribonuclease Inhibitor 533 716 IPR032675 -
Mupr4600g00004 1057 Gene3D Ribonuclease Inhibitor 717 834 IPR032675 -
Mupr4600g00004 1057 SMART till_3 72 206 IPR000157 GO:0007165
Mupr4600g00004 1057 Pfam Leucine Rich Repeat 628 647 IPR011713 -
Mupr4600g00004 1057 ProSiteProfiles TIR domain profile. 71 232 IPR000157 GO:0007165
Mupr4600g00004 1057 FunFam Disease resistance protein (TIR-NBS-LRR class) 69 233 - -
Mupr4600g00004 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 459 IPR027417 -
Mupr4600g00004 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 816 IPR044974 GO:0006952
Mupr4600g00004 1057 SUPERFAMILY Toll/Interleukin receptor TIR domain 62 209 IPR035897 -
Mupr4600g00004 1057 SUPERFAMILY "Winged helix" DNA-binding domain 436 542 IPR036390 -
Mupr4600g00004 1057 Pfam NB-ARC domain 309 435 IPR002182 GO:0043531
Mupr4600g00004 1057 SUPERFAMILY L domain-like 564 837 - -
Mupr4600g00004 1057 Gene3D - 366 449 IPR042197 -
Mupr4600g00004 1057 Gene3D - 20 66 IPR035897 -
Mupr4600g00004 1057 Gene3D - 69 234 IPR035897 -
Mupr4600g00004 1057 PRINTS Disease resistance protein signature 647 663 - -
Mupr4600g00004 1057 PRINTS Disease resistance protein signature 266 281 - -
Mupr4600g00004 1057 PRINTS Disease resistance protein signature 400 414 - -
Mupr4600g00004 1057 Pfam TIR domain 72 237 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4600g00004 Mupr-Chr4600 21150 31608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4600g00004 68 823 WRKY Transcription Factor Family AT4G12020 30.988 4.33e-91 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4600g00004 - - gmx:100813640 1333.16